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SCNpilot_expt_1000_bf_scaffold_3864_curated_21

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 16713..17093

Top 3 Functional Annotations

Value Algorithm Source
Flagellar basal body protein {ECO:0000313|EMBL:EYR82015.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 127.0
  • Bit_score: 206
  • Evalue 2.10e-50
flgB; flagellar basal body rod protein FlgB similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 126.0
  • Bit_score: 158
  • Evalue 1.10e-36
Flagellar basal body rod protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U634_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 126.0
  • Bit_score: 158
  • Evalue 3.50e-36

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGCAACCGATACAACTGTTTGAACTGGCATCGAAACAGGCCGAATGGCTGGCCGTCCGCCAGAGCGTGGTTGCAGGCAACATCGCCAATTCCAACACGCCCGGCTTCAAGGCGAAGGACGTGACCCCCTTCCAGTCGGTGCTCGAGACGACGGGCATCCGCATGGCGGCGACGCAGCCCGGCCACTTCACCGAAACCGAGATGGCCAGCCGCGTCATCGAGACCCGGCCCACCGAGGAGATCGGCGTGCAGGAGTCGGGCAACACCGTCGGCCTTGCCGAGGAACTCATGAAAGAGGGCCAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAAGGCCTTTCATCGCATGATGCTGATGACAGTCAGAAGGTAA
PROTEIN sequence
Length: 127
MQPIQLFELASKQAEWLAVRQSVVAGNIANSNTPGFKAKDVTPFQSVLETTGIRMAATQPGHFTETEMASRVIETRPTEEIGVQESGNTVGLAEELMKEGQVXXXXXXXXXXVKAFHRMMLMTVRR*