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SCNpilot_expt_1000_bf_scaffold_7026_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4831..5292)

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen-III synthase protein HemD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY57_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 150.0
  • Bit_score: 176
  • Evalue 1.50e-41
Uroporphyrinogen-III synthase protein HemD {ECO:0000313|EMBL:EYR79690.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 150.0
  • Bit_score: 176
  • Evalue 2.10e-41
hemD; uroporphyrinogen-III synthase; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 152.0
  • Bit_score: 118
  • Evalue 1.50e-24

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGCGCGATGCGGGCTTCGCCCATGTCCTGAGCGCGGCCGGCGACGGCGAGAGCCTTGCCGGGGTGATCGCGGAGCATCTGCGCGCAAACGGACCGCTGCCGCATCCCCTCCTCTATCTCGCCGGCAATCCGCGCGGTCCGGGCTTCGAAAGCCGGCTGGCGGAGGCCGGCATTCCGTTTCGCACCGTGGAAGGCTACCGCATGGTGCCGCTCGCCCCCACCCGCGAGGCACCGGAGGCCGCCCTGCTGCATCCGGTGCCTGACGCCGTACTGCTCTATTCGCGGGAAAGCGCCCGCGCCTTCTTCGCTCTTGCGCCCCTTACCGGGGCGCCCGGCCGCTTTACCGCCCTGCGCCTGCTCTGCATGAGCGCAAATGTCGCGGCGGCCGTGCCGGAGCGCTTTGCCGCGCACGTCGACATCGCGGCGTCACCCAGCGAGGAAAGCCTGCTGGCGTTGCTCTAA
PROTEIN sequence
Length: 154
MRDAGFAHVLSAAGDGESLAGVIAEHLRANGPLPHPLLYLAGNPRGPGFESRLAEAGIPFRTVEGYRMVPLAPTREAPEAALLHPVPDAVLLYSRESARAFFALAPLTGAPGRFTALRLLCMSANVAAAVPERFAAHVDIAASPSEESLLALL*