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SCNpilot_expt_1000_bf_scaffold_7026_curated_20

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 14317..14820

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane lipoprotein omp19 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBL8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 183.0
  • Bit_score: 264
  • Evalue 1.00e-67
Outer membrane lipoprotein omp19 {ECO:0000256|PIRNR:PIRNR034005}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 183.0
  • Bit_score: 264
  • Evalue 1.50e-67
putative outer membrane lipoprotein Omp19 similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 187.0
  • Bit_score: 204
  • Evalue 2.30e-50

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGCGGATTCACCATGCGGCGGGCGGACTGATGATGGCGCTTGCACTTGCCGGTTGCCAGCGCACCGGGTCGATGGACAGCGTCAATACGCAGCCGAACATCGCGCCGCTCCAGGCCCAGCCGATCGGCTCGGTTTCCTCGAGCCAGCTTCCCGACCCGACCACCAGCACCAGCGGCGGCCAGTTCCCGGACAAGCCGGGCACCGATACCGCGATGGCGACCGGCACCGGCGTCGGCACGGGCGATACCGCGGCCGCCAGCGCCCTCGACGTGAAGAAGGAAGGCATGGTCGGCAACTGGCGCGTCTCCAACGGCCCGTCCTCCTGCGACATGTTCCTGACGCTCACCAATCTCGGCGGCGGTTCGCGCGGCGGCACGCGCGGCTGCGCGGGCGAACTGACGACGATGGGCTCCTGGGAAGTCGCCGNNNNNNNNNNNNNNNNNNNNNATTCCCGCTTCGACGGTTCGACCAATTCGGGCCAGCCTGTCAGCCTCTCGCGCTGA
PROTEIN sequence
Length: 168
MRIHHAAGGLMMALALAGCQRTGSMDSVNTQPNIAPLQAQPIGSVSSSQLPDPTTSTSGGQFPDKPGTDTAMATGTGVGTGDTAAASALDVKKEGMVGNWRVSNGPSSCDMFLTLTNLGGGSRGGTRGCAGELTTMGSWEVAXXXXXXXXSRFDGSTNSGQPVSLSR*