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SCNpilot_expt_1000_bf_scaffold_7026_curated_19

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 13396..14175

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRI2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 259.0
  • Bit_score: 552
  • Evalue 2.30e-154
  • rbh
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 259.0
  • Bit_score: 552
  • Evalue 3.20e-154
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 259.0
  • Bit_score: 535
  • Evalue 6.90e-150
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGTTGAACTCGCTCTCCCGAAGAACTCGCAGATGACCGAAGGCAAGGTCTGGCCGAAGCCGGCCGGGGCCGCGAACACCCGCGAGTTCCGCATCTACCGCTGGAACCCGGACGACGGGAAGAACCCGTCCATCGACACGTTCTACATCGATGTCGACGATTGCGGCCCGATGGTTCTCGACGCGCTGCTCTACATCAAGAACAAGATCGACCCAACGCTGACGCTGCGCCGCTCCTGCCGCGAAGGCATCTGCGGCTCCTGCGCCATGAACATCGACGGCACCAACACGCTCGCCTGCACCAAGGGCATGGACGAAGTGAAGGGGACCGTGAAGGTCTATCCGTTGCCGCACATGCCTGTGGTCAAGGACCTCGTTCCGGACCTTACCAACTTCTACGCCCAGCACCGCTCCATCGAGCCGTGGCTGAAAACCGTGTCGCCGACGCCGGCCAAGGAATGGAAGCAGAGCCATGAGGATCGCCTCAAGCTCGACGGGCTCTACGAGTGCATCCTGTGCGCCTGCTGCTCGACCTCCTGTCCGAGCTACTGGTGGAACGGCGACCGCTATCTCGGCCCCGCCGTGCTGCTGCAGGCCTACCGCTGGCTGATCGACAGCCGCGACGAGGCCACGGGCGAACGCCTCGACAACCTGGAAGACCCCTTCCGCCTCTATCGCTGCCACACGATCATGAATTGCGCCCAGTCCTGCCCGAAGGGCCTCAATCCGGCCAAGGCGATCGGCGAAATCAAGAAGATGCTGGTCGAGCGCCGTCTCTGA
PROTEIN sequence
Length: 260
MVELALPKNSQMTEGKVWPKPAGAANTREFRIYRWNPDDGKNPSIDTFYIDVDDCGPMVLDALLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGMDEVKGTVKVYPLPHMPVVKDLVPDLTNFYAQHRSIEPWLKTVSPTPAKEWKQSHEDRLKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQSCPKGLNPAKAIGEIKKMLVERRL*