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SCNpilot_expt_1000_bf_scaffold_7026_curated_18

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 12511..13377

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 288.0
  • Bit_score: 553
  • Evalue 1.60e-154
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0J4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 288.0
  • Bit_score: 551
  • Evalue 5.60e-154
  • rbh
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 288.0
  • Bit_score: 545
  • Evalue 9.60e-153
  • rbh

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
GTGCATCTCGACCATCTCGACCCGGCAGTGCTGCACGAGCGCCTGCCGGGCATTTCCGAGAGCGCGAAGATCTTCGCCGGCGTCGACGTAACGCGCGAGCCGATCCCGGTCCTGCCGACCGTCCACTACAACATGGGCGGCATTCCCACGAACTACTGGGGCGAGGTGCTGAATGCCGACAGCCAGAACCCCGAGCGCATCGCGCCCGGCCTGATGGCGGTGGGGGAAGCCGGCTGTGCCTCGGTGCACGGCGCCAACCGCCTCGGCTCCAACTCGCTGATCGACCTCGTGGTCTTCGGCCGTGCCGCCGCCATCCGCGCCGGCCAGGTCATCGACCGCAACGAGGCGATCCCGGCGCTCGACATCGCCGCCTGCGACAGGATCATGGACCGCTTCGATCGCCTCAGGAACGCCAATGGCAGCACGCCGACGGCGATCCTGCGCGACAAGATGCAGCGCACCATGCAGGAAGACGCCGCCGTGTTCCGCACGCAGGAATCGCTGGAAAGCGGCTGCAAGCGCATGACGGAGATCTGGAAGGAAATGCCGGACATCAAGGTCACCGACCGCTCGATGATCTGGAACTCCGACCTCGTCGAGACGCTGGAGCTGGAAAACCTGATGGCCAACGCCATCACGACCGTCTACGGCGCCGAAGCCCGCAAGGAAAGCCGCGGCTCGCATGCCCGCGAGGACTATGCGACCGGCCCGCTCGGCGGCCGCGACGACGTCAACTGGCGCAAGCACACGCTCGCCTGGGTCAACGAGGCGGGCGAGGTGACGCTCGACTACCGCCCGGTGCATACCGACCTCATCGCCGACGGGATCGATCCCAAGAAGATCGAGCCCAAGGCCCGCGTCTACTGA
PROTEIN sequence
Length: 289
VHLDHLDPAVLHERLPGISESAKIFAGVDVTREPIPVLPTVHYNMGGIPTNYWGEVLNADSQNPERIAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAIRAGQVIDRNEAIPALDIAACDRIMDRFDRLRNANGSTPTAILRDKMQRTMQEDAAVFRTQESLESGCKRMTEIWKEMPDIKVTDRSMIWNSDLVETLELENLMANAITTVYGAEARKESRGSHAREDYATGPLGGRDDVNWRKHTLAWVNEAGEVTLDYRPVHTDLIADGIDPKKIEPKARVY*