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SCNpilot_expt_1000_bf_scaffold_2774_curated_16

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 13042..14364

Top 3 Functional Annotations

Value Algorithm Source
Sialic acid TRAP transporter permease protein SiaT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVN9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 440.0
  • Bit_score: 822
  • Evalue 1.50e-235
  • rbh
Sialic acid TRAP transporter permease protein SiaT {ECO:0000313|EMBL:EYR77705.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 440.0
  • Bit_score: 822
  • Evalue 2.10e-235
dctM; TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 441.0
  • Bit_score: 654
  • Evalue 2.90e-185
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGAGCTATGAATTCATCGCAATCACGATGTTCGCCGGCATGATGGTGCTGCTGCTCACCGGGCAGCGCGTCTTTGCCGTCATCGGCTTCGTCGGCGTCGTCGCGGCCTTCATGCTGTGGGGCACGGGCGGCTCGGAAATGGGCTTCGCCTCCGTCATGAAGCTCGTCAAATGGTATCCGATGCTGACGGTGCCGATGTTCGTCTTCATGGGCTACATGCTCTCGGAATCGGGCATCGCCGAGGACATGTACAAGGCGATCCATGTCTGGATGGGGCCGATCAACGGCGGCCTTGCGTTGGGCACCGTGGGCCTCATGGTGATCATCTCCGCCATGAACGGCCTTTCGGTCGCCGGCATGGCGATCGGCGCCACCATCGCGCTGCCGGAGCTTCTGCGCCGCGGCTACGACAAGGTGATGATGACGGGCGTGGTGCAGGGCGGCTCGACGCTCGGCATCCTGCTGCCGCCGAGCGTCGTGCTCGTGCTCTACGGCATGATCGCCCGCGTGCCGGTGGGCCAGCTCTGGCTCGCCGGCGTGCTGCCGGGCCTCCTGATGGCCGCGCTCATGGCGATCTACGTCTATGTCCGCTGCCGCATCAACCCGTCGCTCGGCCCGGCGCTGCCGGTCTCGGAGCGCAACGTGCCGTTCGGCGAGAAGGTACGGCTGCTTTCGGCCGGCATCGTGCCGCTCGGCATCTTCGTGCTGATGATGTGGCTGTTCCTCAGCGGCATCGCCAGCCTCGTCGAAAGCTCGGCGGTCGGCGCGATCTGCTCGGCGCTCGTCGCCTGGTGGCGCGGCCGGCTGAGCTGGCCGCTGTGGAACGACGTGCTGCAGAAGACGCTCGGCATCACCTGCATGTTCATGTGGATCCTGATCGCCTCGCTGTGCTTCGGCGCCGTCTTCGACGGTCTGGGGGCGGTCAAGTCGATCGAGCGCTTCTTCCTCGGCGACCTCGGGCTGGAGCCCTGGCAGGTGCTGGTGCTGATGCAGCTCTCGTTCCTGATCATGGGGATGTTCCTCGACGACACGGCGATGCTCGTCATCGTGGCGCCGCTCTACATTCCGCTGGTGCAAAAGCTGGGCTTCGACCTCGTCTGGTACGGCGTGCTCTACACGATCACCTGCCAGATCGCCTACATCACCCCGCCGTTCGGCTACAACCTCTTCATGATGCGCGCCATGGCGCCGCCGGAAATCGGCATGCGGGACATCTACAAGTCGATCTGGCCGTTCGTCGGCATCATGCTGGCCAGCCTGATCATCATCGGCGTGTTCCCCGAGATCGCGACGTGGCTGCCGAACAACTACTACAGCAAGTGA
PROTEIN sequence
Length: 441
MSYEFIAITMFAGMMVLLLTGQRVFAVIGFVGVVAAFMLWGTGGSEMGFASVMKLVKWYPMLTVPMFVFMGYMLSESGIAEDMYKAIHVWMGPINGGLALGTVGLMVIISAMNGLSVAGMAIGATIALPELLRRGYDKVMMTGVVQGGSTLGILLPPSVVLVLYGMIARVPVGQLWLAGVLPGLLMAALMAIYVYVRCRINPSLGPALPVSERNVPFGEKVRLLSAGIVPLGIFVLMMWLFLSGIASLVESSAVGAICSALVAWWRGRLSWPLWNDVLQKTLGITCMFMWILIASLCFGAVFDGLGAVKSIERFFLGDLGLEPWQVLVLMQLSFLIMGMFLDDTAMLVIVAPLYIPLVQKLGFDLVWYGVLYTITCQIAYITPPFGYNLFMMRAMAPPEIGMRDIYKSIWPFVGIMLASLIIIGVFPEIATWLPNNYYSK*