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SCNpilot_expt_1000_bf_scaffold_2774_curated_20

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 18569..19714

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent methanol dehydrogenase Mdh n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFP5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 381.0
  • Bit_score: 744
  • Evalue 4.50e-212
  • rbh
NAD-dependent methanol dehydrogenase Mdh {ECO:0000313|EMBL:EYR77709.1}; EC=1.1.1.244 {ECO:0000313|EMBL:EYR77709.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 381.0
  • Bit_score: 744
  • Evalue 6.40e-212
putative dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 381.0
  • Bit_score: 705
  • Evalue 9.60e-201
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGACCATCACCGCCAACTGGAGCTATCCGACCGCGATCAAGTTCGGCGCGAGCCGGATCAAGGAACTGGCCGACCACTGCAAGGCGGTCGGCATGAAGAAGCCGCTGCTCGTCACCGACCGGGGCCTGTCGACCATGGCGATCACGCAGAACGCGCTCGACATCCTGGAGGCCGCCGGCCTCGGCCGGGCGATGTTCGCCGAGGTCGATCCGAACCCGACCGACAGGAACCTCGAAGCCGGCGTAAAGGCCTTCAAGGCGGGCGGCCATGACGGCGTCGTCGCCTTCGGCGGCGGTTCCGGCCTCGACCTCGGCAAGGCCGTCGCCTTCATGGCCGGCCAGACGCGCCCGGTCTGGGACTTCGAGGATGTCGGCGACTGGTGGACCCGCGCCAATTCGGACGGCATCGCGCCCATCGTCGCCGTGCCGACGACGGCCGGCACCGGCTCGGAAGTCGGCCGCGCCTCGGTCATCACCAATTCGCAGACGCATACCAAGAAGGTGATCTTCCATCCGAAGTTCCTGCCTTCGGTGACGATCTGCGACCCGGAGCTGACGGTCGGCATGCCGAAGGTCATCACCGCCGGCACCGGCATGGACGCCTTCGCCCATTGCCTCGAAGCCTATTCCTCGCCCTTCTACCACCCGATGAGCCAGGGCATCGCGCTCGAAGGCATGCGCCTCGTCAAGGAATACCTGCCGCGCGCCTACAGGGACGGCACGGATATCGAGGCGCGCGCCAACATGATGTCGGCTGCCGCGATGGGCGCCGTCGCCTTCCAGAAGGGCCTCGGCGCGATCCACTCGCTGTCGCACCCGGTCGGCGCGATCTACAACACGCACCACGGCATGACGAACGCCGTGGTGATGCCGCCGGTGCTGACGTTCAACCGCCCGGCCATCGAGGCGAGGATCGCCAGCGCTGCCGCCTATCTCGGCATTGCCGGCGGCTTCGACGGCTTCTTCGACTACGTGCTGCGGCTGCGCGAGGAACTCGGCGTGCCGGACAAGCTCGCCGCGCTCGGCGTCGGCACCGACCGCATCGACGAGATGGCCGCCATGGCCATCGTCGATCCGACGGCCGGCGGCAATCCGGTGGAACTGACGCTCGACGCGGCCAAGCGCCTCTTCGTCGAGTGCATCTGA
PROTEIN sequence
Length: 382
MTITANWSYPTAIKFGASRIKELADHCKAVGMKKPLLVTDRGLSTMAITQNALDILEAAGLGRAMFAEVDPNPTDRNLEAGVKAFKAGGHDGVVAFGGGSGLDLGKAVAFMAGQTRPVWDFEDVGDWWTRANSDGIAPIVAVPTTAGTGSEVGRASVITNSQTHTKKVIFHPKFLPSVTICDPELTVGMPKVITAGTGMDAFAHCLEAYSSPFYHPMSQGIALEGMRLVKEYLPRAYRDGTDIEARANMMSAAAMGAVAFQKGLGAIHSLSHPVGAIYNTHHGMTNAVVMPPVLTFNRPAIEARIASAAAYLGIAGGFDGFFDYVLRLREELGVPDKLAALGVGTDRIDEMAAMAIVDPTAGGNPVELTLDAAKRLFVECI*