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SCNpilot_expt_1000_bf_scaffold_2774_curated_23

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(22462..23655)

Top 3 Functional Annotations

Value Algorithm Source
Cellulase family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPP0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 400.0
  • Bit_score: 695
  • Evalue 2.50e-197
  • rbh
Cellulase family protein {ECO:0000313|EMBL:EYR77712.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 400.0
  • Bit_score: 695
  • Evalue 3.50e-197
glycoside hydrolase family 5 similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 393.0
  • Bit_score: 460
  • Evalue 5.60e-127
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGTTCGAAAAGCTTCGCCCCGCCCTCCTCTGCCTCGCGCTCGCGGGCACGCTGCCATCGGCTGGCCTTGCCGCGGACCTCATGGCCTTCTGGGATGCCCCGCAGAAGGGCGGCAACAGCTTCAACGCGGCGGAACCCGACAAGGCCTACTTCGAGGCGCTCGCCGCGACCGGGGCGACATGGGTTCGCCTGACCTTCAGCAAGTGGAAGGGCGAAGGCCGGGATTTCCTCATCGGCAACGCCGACCGCTACGAGGGCCTGCCGCCCAAGGACATCGCAAGGCTGCGCAGCACGCTCGATGCAGCCCATGCCGCCGGCCTGAAGGTGGTGGTGGCGCCGCTGAGCCTGCCCGGCGCCCGGTGGAAACAGCAGAACGGCGGGATATTCGACGACCGGCTCTGGTCCGATCCCGGCTTCGCCGAACAGGCCGCGGCGTTCTGGCGCGACCTTGCCGCAGCGCTGAAGGATCACCCGTCCGTCGCCGCCTACAATCTCCTCAACGAGCCCGCGCCGGAAAAGACGACCGGCCTTGCCGAGAACGGCGCGATGGCCGATCTCCTCGCATGGCAGGAGGCCAATGCCGGCGGCCCGCGCGACCTGCCGCAGCTCTACACGCGGATCATCGATGCGATTCGAGCCGTCGATCCCCTCACCCCGGTGATGGTCGATGGCGGCTACTATGCCAATCCGCGCGCGCTCGCATCATGGCCGAAGCGCCTTGCCGACGACAGGGTGCTCTACGCGTTCCACATGTACGAACCCTATGACGCGACCAGCGCGCCGAACATGAAGCGGGAAACGCCGCTGCGCTATCCCGGCGTGACGACCGACTATGCCGGCGGCAAGACGGAATGGGACCGCACGACCGTCGCCGACCATATCGGCGCGGCCTTCGACTGGGCGAAGGCGGAGGGCCTGCCGCCGACGCGCGTGGTCGCCGCCGAATTCGGCTGCATGCGCCTGTGGGCCGATTGCGGCGCCTATCTGACCGACGTGATGGATGCGGTGGAGGACAGGGGCGGCCACTGGGCCTTCTATTCCTTCCGCGAAGACGAGTGGGAAGGCATGGACTACGAGCTTCCGGCCGGGGTGAAGCCCGGCCAGTTCTACTGGATGACGGAACAGGGCAAGGCGGACAGGCTGCCGCGCAACGGCAAGCTGATGGACCTTCTGAAGGCCCGCATGCAGAAATAG
PROTEIN sequence
Length: 398
MFEKLRPALLCLALAGTLPSAGLAADLMAFWDAPQKGGNSFNAAEPDKAYFEALAATGATWVRLTFSKWKGEGRDFLIGNADRYEGLPPKDIARLRSTLDAAHAAGLKVVVAPLSLPGARWKQQNGGIFDDRLWSDPGFAEQAAAFWRDLAAALKDHPSVAAYNLLNEPAPEKTTGLAENGAMADLLAWQEANAGGPRDLPQLYTRIIDAIRAVDPLTPVMVDGGYYANPRALASWPKRLADDRVLYAFHMYEPYDATSAPNMKRETPLRYPGVTTDYAGGKTEWDRTTVADHIGAAFDWAKAEGLPPTRVVAAEFGCMRLWADCGAYLTDVMDAVEDRGGHWAFYSFREDEWEGMDYELPAGVKPGQFYWMTEQGKADRLPRNGKLMDLLKARMQK*