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SCNpilot_expt_1000_bf_scaffold_8356_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1952..2143)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:AJA11491.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 63.0
  • Bit_score: 94
  • Evalue 4.40e-17
transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C6E similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 59.0
  • Bit_score: 92
  • Evalue 2.10e-16
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 63.0
  • Bit_score: 89
  • Evalue 5.50e-16

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
TTGGCCGACGACGCGCCCTGTGCGGACATTCTACATTTAGTCGCGGCGGTGCGCGGCGCCGTGAACGGGCTGATGGACGAGATCATCGTCGATCATCTCGATCAGCATGTCGCGAAGCCTGGCCTAAGCGCCGCCGAACGCGCGGCAGGCGCCGCCGAACTGGCGACTGTGATCCGGCGTTATTCCAAATGA
PROTEIN sequence
Length: 64
LADDAPCADILHLVAAVRGAVNGLMDEIIVDHLDQHVAKPGLSAAERAAGAAELATVIRRYSK*