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SCNpilot_expt_1000_bf_scaffold_4021_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2886..3659)

Top 3 Functional Annotations

Value Algorithm Source
Aldose 1-epimerase GalM n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVB7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 231.0
  • Bit_score: 392
  • Evalue 3.90e-106
  • rbh
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 231.0
  • Bit_score: 392
  • Evalue 5.40e-106
galM; aldose 1-epimerase; K01785 aldose 1-epimerase [EC:5.1.3.3] similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 231.0
  • Bit_score: 318
  • Evalue 2.20e-84
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
GTGGATGCAGGAAATGAAATCTTCGGGCGCCTCGAAACGGGCGGGGCGGTCGAGCGCATCGCGATCTCCGGTGGCGGGCTGACGGCGCATGTGCTGACCTTCGGCGCCATCATCCAGGACCTCAGGCTTGCGGGGCACGATGCTCCGCTCGTGCTGGGTTTCGAGGATCTCGCCTCCTATCTCGACCATTCCCCCTATTTCGGCGCGACGCCTGGCCGCTGCGCCAACCGCATCGGCGGCGGCCGGTTCTCCATCGACGGCATTGCCTACCAACTCGAATGCAACGAGCGCGGCGTGACGCACCTGCACGGCGGCAGCGACGGAACCGGCCGGCAGACCTGGCAGGTCGCGCAGCAGGGCGCGGATTTCGTCACGTTGGCGTTGACCGATCCGGCCGGCCGCGCCGGCTATCCCGGCAATTGCGCCATCGCCTGCACCTACCGGCTACCCGGCGACGGCGTGCTCTCCGTGACCTACGAGGCGACGACGGATGCGCCGACGCCCGTCAACCTCTGCCAGCACAGCTATTTCATCCTCGACGGCAGCGCCGACGCGCTCGGCCACGACATCCGCCTTGCCGCCGATCACTACCTGCCCGTCGACGAGAACCTCATCCCGACCGGCGAGATCCGCCCGGTCGCCGGCACGCCATTCGACCTCACAGGCTGGACGCCGATGCGCCGGCAGATCGAGCNNNNNNNNNNNNNNNNNNNNNNNAGCGGCCGGTGGGTGCGGTGCGCAGCCCCCTCTCCGGCATCTCGCTCGAGGTCCTGA
PROTEIN sequence
Length: 258
VDAGNEIFGRLETGGAVERIAISGGGLTAHVLTFGAIIQDLRLAGHDAPLVLGFEDLASYLDHSPYFGATPGRCANRIGGGRFSIDGIAYQLECNERGVTHLHGGSDGTGRQTWQVAQQGADFVTLALTDPAGRAGYPGNCAIACTYRLPGDGVLSVTYEATTDAPTPVNLCQHSYFILDGSADALGHDIRLAADHYLPVDENLIPTGEIRPVAGTPFDLTGWTPMRRQIEXXXXXXXXSGRWVRCAAPSPASRSRS*