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SCNpilot_expt_1000_bf_scaffold_3931_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 5613..6635

Top 3 Functional Annotations

Value Algorithm Source
Dipeptide transport system permease protein DppB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTD4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 340.0
  • Bit_score: 618
  • Evalue 5.70e-174
  • rbh
ABC-type dipeptide/oligopeptide/nickel transport system permease component {ECO:0000313|EMBL:EYR78542.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 340.0
  • Bit_score: 618
  • Evalue 8.00e-174
binding-protein-dependent transporters inner membrane component; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 335.0
  • Bit_score: 342
  • Evalue 1.90e-91
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGGAACTTCTCCGCTACATCCTGCGCCGCATGATCCTCTCCGCCTTCGTGGTGGTGGGAGTGACCTTTCTGGTCTTCATCGTGGCGCAGGTGGTTCCCTCGGACCCCGCAGCGCTCTATGCCGGCCCGCGCCCGACGGCCGAGCAGATCGAGAAGGCGCGTCAGGAACTCAATCTCGACGCGCCGCTCCCGGCGCGCTTCGCGACCTTCGCCTCGGCCATGGCCTCCGGCGATTTCGGCGTCTCCTACAAGTCGCGCCGGCTGATCGCGGAGGACCTTCGGGCCTATCTTCCAGCGACGCTGGAGCTTGCGGTCTTCTCCACCGGCCTTGCGCTGCTGATCGGCATTCCGCTCGGGGTCGCCGCCGCCGCGCGGCAGGGCCGGTGGCCTGACCGGCTCGGCAGCCTCGGATCCATCGCGGCCGTCGCCATGCCGACCTTCTTCCTGGCGATGCTGCTGCAGCTCGTCTTCGCGCAATGGCTCGGCATCCTGCCGCTCTCCGGGCGCCTGTCGCGCGAGATCGCCATTTCCGCGCCGTTGCAGATGGTGACCGGCTTCAACCTCATCGATGCGATCATCGCCGGGCGCGCCGACGTCTTCGGCAATGCGCTGGCCCACCTCATCCTGCCGGCCCTGACGCTCGCTTCCTATCCGGCCGGCGTCGCCATGCGGCTGACGCGCTCGGCGATGATCGAAATCCTCGAGCGCCGCCATGTGGTCGCCGCCCGCGCGCTCGGCCTTTCCGAGCCGCGCATCCTCTTCGGCCACGCGCTGCCCAACGCCATGGGGCCGGCGCTGACCGTGATCGGCCTCTCCTTCGCCTATGCGCTGACCGGGGCGGTGCTGGTCGAGATCATCTTCGCCTGGCCGGGCCTCGGCCGCTATGTCTCCGAGGCGATCCTCGCCAAGGACTTCCCGGTCATCGCCGCCGTCACCATGGTGGTGACGATCTGCTATGTCGTGATGAACCTCATCATCGACATCGCCCAGGCCCTGGTCGACCCGCGGGTGGCGCTCTCATGA
PROTEIN sequence
Length: 341
MELLRYILRRMILSAFVVVGVTFLVFIVAQVVPSDPAALYAGPRPTAEQIEKARQELNLDAPLPARFATFASAMASGDFGVSYKSRRLIAEDLRAYLPATLELAVFSTGLALLIGIPLGVAAAARQGRWPDRLGSLGSIAAVAMPTFFLAMLLQLVFAQWLGILPLSGRLSREIAISAPLQMVTGFNLIDAIIAGRADVFGNALAHLILPALTLASYPAGVAMRLTRSAMIEILERRHVVAARALGLSEPRILFGHALPNAMGPALTVIGLSFAYALTGAVLVEIIFAWPGLGRYVSEAILAKDFPVIAAVTMVVTICYVVMNLIIDIAQALVDPRVALS*