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scnpilot_solids1_trim150_scaffold_887_8

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 6549..7985

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF3579 related cluster n=1 Tax=unknown RepID=UPI0003CF3579 similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 482.0
  • Bit_score: 753
  • Evalue 1.60e-214
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EZQ14593.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 489.0
  • Bit_score: 898
  • Evalue 3.30e-258
conjugation TrbI-like protein; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 471.0
  • Bit_score: 326
  • Evalue 2.00e-86

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
ATGAGCCAGATCGACTATAACGATCTCGATGGCAGCCCGTCCGTTGCGCGACGTGGCGCCGGCGTCGGCACGAAAGTCGCCATGGTCGGGTTCGGGCTTCTGGTCGCCGGCGCGCTCATCTGGATCAACTGGCCGCGCTCTCCGGCATCGAGCGACGTAGCGGCCGGTTCGGAAGAGGACTTCAACCCGCCGCAATTTCGTTCGCCGGGACTGTCCGAAGCGCCGCAACAGGCCGACAAGGCGATAGATCAGATCGTCGTACCGCCACCGGCCGAAAGCGAGGACAATACCAAACAGGCCGATAACGTCGACCAGACGGTGCAGCCGGGGCAGGATCTCGATGCGCAGCGGCGCGCGCTCGAAGCCCAGATGGCCGCCGAGGAGGCGCGACGCAAGGCCGAAGAGGAAGCGCGACGCAAGGCCGACGAAGCCGAAGCCGAGAAAAAGTTATGGGAACGCCTGCGTTCGAACCAGATGGTGACGACCGATCAAACCGGAGGCGCGGGCCCTCAGGAAGCCCCGGTACAGGCCGAGATTGCCGCTGACGGCCAGATCATCCCGGTGCCAGGAGCCGACAGTGACCCGAACAAGGCTTTCCTCGCGCAATCCGAATCCAGTTCTCGAGGCATGGCGAAGGCGCGGGTCTTCAGGCGCACCGACGCCATGATCGCCGAAGGCACCATGATCCGCGGTTTTCTCGAAACCGCGATCAACACCGATCTGCCCGGCATGGTCCGTGCTGTCGTGCGTGAAGACGTCCATTCGCTGGACGGCCGCCGCATCCTGATCCCGAAGGGCTCGCGCCTGACCGGCGAATACCGTTCCGGGCTAGCGCGGGGCCAGAAGCGTGTATTCATCGTATGGAACCGCGTCATCCGTTCCGACGGCGTTTCCGTCGATATTGCATCCCCCGGCGCCGACAGTCTCGGCCGCGGCGGTCTCGGCGGGCGGATCGATACCCATTGGCTCGAACGCTACGGTAATGCGATCATGCTTTCCGTCGTCGGCGGCGTGTCGGAATATCTGTCTTCGCTCGCCGACGACAATGACGGCTCCCAACAGCGTCAGGTTACGACCGTCGATCCTGTGACGGGCCAAACCGTCACCGTCACCTATGGCGGCTATGGCTCGCAACGCGACGCCCGCTCGATCGCGTTCGACAAATCCTCGACGGCCCTGCAGCAGCTTGCGCAGGAGGCGTTCCGCGACAGCCAGAACATTCCCCCGACCATCTATGTCGACCAAGGCACCCCAGTTGTGGTGTTCGTCCGACGCGATCTGGATTTCTCCGCACTCTACGCCGATCCCGTGCAAGAGGAGCTGGCTCGCCTGAAACGCGGCGGCAGGCCGAAAACGGCGATTGATCCAACGCCGCTCTTCATGACGCCCAAGGATCATTATTATCCAGGGTATTTCCCGCCGAGGCCGGTCAAATGA
PROTEIN sequence
Length: 479
MSQIDYNDLDGSPSVARRGAGVGTKVAMVGFGLLVAGALIWINWPRSPASSDVAAGSEEDFNPPQFRSPGLSEAPQQADKAIDQIVVPPPAESEDNTKQADNVDQTVQPGQDLDAQRRALEAQMAAEEARRKAEEEARRKADEAEAEKKLWERLRSNQMVTTDQTGGAGPQEAPVQAEIAADGQIIPVPGADSDPNKAFLAQSESSSRGMAKARVFRRTDAMIAEGTMIRGFLETAINTDLPGMVRAVVREDVHSLDGRRILIPKGSRLTGEYRSGLARGQKRVFIVWNRVIRSDGVSVDIASPGADSLGRGGLGGRIDTHWLERYGNAIMLSVVGGVSEYLSSLADDNDGSQQRQVTTVDPVTGQTVTVTYGGYGSQRDARSIAFDKSSTALQQLAQEAFRDSQNIPPTIYVDQGTPVVVFVRRDLDFSALYADPVQEELARLKRGGRPKTAIDPTPLFMTPKDHYYPGYFPPRPVK*