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scnpilot_solids1_trim150_scaffold_67_102

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 105445..109311

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 999.99
  • Bit_score: 2399
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 999.99
  • Bit_score: 2329
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Microbacterium barkeri RepID=UPI0002E152F6 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 999.99
  • Bit_score: 2384
  • Evalue 0.0
  • rbh

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3867
GTGCTCGACGCAACAACTTTCGATGAGCTTCGAATCGGCCTCGCGACCGCGGAGGACATCCGCGGATGGTCCTACGGCGAGGTCAAGAAGCCCGAGACCATCAATTACCGCACGCTGAAGCCCGAGAAGGACGGGCTCTTCGGCGAGCAGATCTTCGGACCCTCCCGCGACTGGGAGTGCGCCTGCGGCAAGTACAAGCGCGTGCGCTTCAAGGGCATCGTGTGCGAGCGCTGCGGCGTGGAGGTCACCAAGAGCTCCGTCCGTCGTGAGCGCATGGGCCACATCGAGCTCGCCGCGCCCGTCACCCACATCTGGTACTTCAAGGGCGTTCCGTCGCGCCTGGGGTACCTGCTGGACATGGCGCCGAAGGACCTCGAGAAGGTCATCTACTTCGCCGCGTACATGGTCATCTCGGTCGACGAGGAGGCTCGTCACCGCGACCTGGCCACCCAGGAGAACAACATCCGCCTCGAGCTGAAGACGCTGGGCGACCGCCGCGATGCCAAGATCGCGGAGCGCATGGCCAAGCTGGAGGAGGAGCTCGCCGCCCTGGAGGCGGAGGGTGCCAAGGCCGACGCCAAGAAGAAGGTCAAGGACGCAGCCGAGAAGGAGATGACCCTCACCCGCAAGGGTGCCGACGAGGCCATCGCCAAGCTCGAGCGCGTGTGGGAGGACTTCCGCACGCTCGAGGTGGGCGCGCTGCGCCCCGAGGACGACGTGTTCCACGAGCTGCAGGACCGCTTCGGCCAGTACTTCGAGGCCTACATGGGCGCCGAGTCCATCAAGCGCCGCCTGGAGACCTTCGACCTGGCCGGCGAGGCCGAGAGCCTGCGCCTGCAGATCTCCGAGGGCAAGGGCCAGCGCAAGATCCGCGCGATCAAGCGCCTGAAGGTCGTCAACTCGTTCCTGCAGACCGGTATGAGCCCGGCCGCCATGGTGCTGGACGTCGTCCCGGTGATCCCGCCGGAGCTGCGCCCGATGGTGCAGCTGGACGGTGGCCGCTTCGCGACCAGCGACCTGAACGACCTGTACCGCCGCGTGATCAACCGCAACAACCGTCTTCGTCGTCTGATCGACCTCGGTGCCCCCGAGATCATCGTCAACAACGAGAAGCGGATGCTGCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGCCGCGGTCGTCCCGTCACCGGCACCGGCAACCGCGCCCTGAAGTCCCTGAGCGACATGCTCAAGGGCAAGCAGGGTCGCTTCCGCCAGAACCTGCTCGGCAAGCGCGTGGACTACTCGGGCCGTTCGGTGATCATCGTGGGCCCGCAGCTCAAGCTGCACCAGTGCGGTCTGCCCAAGGAGATGGCGATCGAGCTGTTCAAGCCGTTCGTGATCAAGCGCCTGATCGACCTGGGTCACTCGCAGAACATCAAGGCCGCCAAGCGCGCGGTCGAGCGCACTCGTCCCGAGGTGTGGGACGTGCTCGAGGAGGTCATCCGCGAGCGCCCCGTGCTGCTGAACCGTGCACCCACCCTGCACCGTCTCGGCATCCAGGCGTTCGAGCCGCAGCTCGTCGAGGGCAAGGCCATCCAGCTCCACCCGCTGGTGTGCGCTGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACCTGCCGCTGTCGGTCGAGGCTCAGGCCGAGGCCCGCGTGCTGATGCTCGCCTCGAACAACATCCTCAAGCCGTCCGACGGCCGTCCGGTCACCCTGCCCTCGCAGGACATGATCATCGGTCTGCACCACCTGACCACGGTCAAGGAGGGCGCTGCCGGTGAGGGTCGTGCGTTCGGTTCGGTCGGCGAGGCCATCCTCGCCAACGACGAGGGCACGCTGGACCTGCAGGCCAAGGCCCGCATCCGCATCCCCGGCCTGACCTTCCTCGAGGGCGAGGCCCCCGAGGGCTACGAGCGCCACGGCCTCGTGGACGTCTCGCTGGGCCAGGCGATCTTCAACGACACCCTGCCGAAGGGCTACCCCTTCGTGCGCGGTGTCGCCGACAAGGGCAAGCTGTCGCAGATCGTCAACAAGCTGGCCGAGGAGTACCCGAAGGTCGAGACCGCGGCATCCCTGGACCGCATCAAGGATGCCGGTTTCCACTGGGCCACGCGTTCCGGCGTGACCGTCGCGCTGAGCGACGTCGTCACCCCGCCGAACAAGAGCGAGATCGTCGGCACCTACGAGAAGCGCGCCGAGAAGGTCCAGGGCCAGTACGACAAGGGTCTGATCACCGACGCCGAGCGTCGTCGCGAGCTCATCCAGATCTGGACGAGCGCCACCGACGAGGTGCAGGCCGCCATGATCGAGCACTTCCCGGCGGACAACACCATCTACCGGATGGTTTCCTCGGGCGCTCGAGGCAACTGGCTGCAGATCCGCAACATCGCGGGTATGCGCGGTCTGGTGAACAACCCCAAGGGTGAGCTCATCCCGCGTCCGATCATCTCCTCGTACCGCGAGGGCCTGTCGGTGGCGGAGTACTTCATCGCCACGCACGGTACCCGCAAGGGTCTGGCCGACACCGCTCTGCGCACCGCCGACTCGGGTTACCTGACCCGTCGTCTGGTGGACGTCTCGCAGGATGTCATCATCCGCGAGGACGACTGCGGCACGACGAAGGGTCTGGAGCTGCCGATCGCCGAGCCGAACACGGCCGGCGAGCTGGTCCGCAACGCCAACGTGGAGAACTCCGTGTTCGCCCGCACCCTGGCATCCGATGTCGTGAACGAGGCCGGTGAGGTTCTCGCGACCGCAGGTGAGGACGTCGGCGACGTTCTCATCGACAAGCTGGTCGCAGCCGGAGTGCAGTCGATCAAGGTCCGCTCCGTGCTGACCTGCGACTCGGCTGTCGGCGTCTGCGCGCAGTGCTACGGCCGTTCGCTGGCCACCGGCAAGACGGTGGACATCGGCGAGGCTGTGGGCATCATCGCGGCCCAGTCGATCGGTGAGCCCGGCACCCAGCTGACCATGCGCAACTTCCACCTCGCGTCGGCCGGTGACATCACCCAGGGTCTGCCGCGTGTGCAGGAGCTGTTCGAGGCCCGCACGCCGAAGGGCGCCTCCCCGATCGCCGAGGCCGACGGCCGCATCGCGATCGAGGAGACCGAGAAGGCCAAGAAGGTCATCCTCACGCCTGACAACGGTGACGAGGAAGTCGTCTACCCGGTGCTGAAGCGCGCGACGCTTCTCGTCGAGGACGGCCAGCACGTCTCCGTCGGCCAGCCGCTGCAGGTCGGCACGCTCGACCCCAAGGAGGTCATGCGCGTCATGGGCGCCCGCGAGGTGCAGAAGTACCTCGTCGGCGGCGTGCAGGGCGTGTACCGTTCGCAGGGCGTGCCGATCCACGACAAGCACATCGAGGTCATCGTCCGTCAGATGCTGCGCAAGGTCACCGTGGTCGACCACGGTGACACCGCGCTGCTCCCGGGTGAGATGGTCGACCTGAAGCGCTACCAGCAGATCAACCGCGAGGCCGTGTCCGAGGGCAAGCGCCCCGCATCCGGTCGCCCGGAGCTGATGGGTATCACGAAGGCGTCCCTCGCGACCGAGTCGTGGCTGTCGGCGGCTTCCTTCCAGGAGACGACCCGCGTGCTCACGCAGGCCGCCATGGAGGGCAAGCGCGACCCGCTGGTCGGTCTCAAGGAGAACGTCATCATCGGTAAGCTCATCCCGGCCGGCACCGGTCTGACCAAGTACCGTGACATCACGGTCGAGGCGACGGAAGAGGCCAAGAGCGAGCGCTACCCGAACCGGATCTTCGCATCCGACGGAGCGTACGCCGACGGCGACTTCGGCTACGTCGACTTCGACGCGTTCTCGACCGACGACATCACGCCCGGTACATACAACTGA
PROTEIN sequence
Length: 1289
VLDATTFDELRIGLATAEDIRGWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWECACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDMAPKDLEKVIYFAAYMVISVDEEARHRDLATQENNIRLELKTLGDRRDAKIAERMAKLEEELAALEAEGAKADAKKKVKDAAEKEMTLTRKGADEAIAKLERVWEDFRTLEVGALRPEDDVFHELQDRFGQYFEAYMGAESIKRRLETFDLAGEAESLRLQISEGKGQRKIRAIKRLKVVNSFLQTGMSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHQCGLPKEMAIELFKPFVIKRLIDLGHSQNIKAAKRAVERTRPEVWDVLEEVIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKEGAAGEGRAFGSVGEAILANDEGTLDLQAKARIRIPGLTFLEGEAPEGYERHGLVDVSLGQAIFNDTLPKGYPFVRGVADKGKLSQIVNKLAEEYPKVETAASLDRIKDAGFHWATRSGVTVALSDVVTPPNKSEIVGTYEKRAEKVQGQYDKGLITDAERRRELIQIWTSATDEVQAAMIEHFPADNTIYRMVSSGARGNWLQIRNIAGMRGLVNNPKGELIPRPIISSYREGLSVAEYFIATHGTRKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTKGLELPIAEPNTAGELVRNANVENSVFARTLASDVVNEAGEVLATAGEDVGDVLIDKLVAAGVQSIKVRSVLTCDSAVGVCAQCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRNFHLASAGDITQGLPRVQELFEARTPKGASPIAEADGRIAIEETEKAKKVILTPDNGDEEVVYPVLKRATLLVEDGQHVSVGQPLQVGTLDPKEVMRVMGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVVDHGDTALLPGEMVDLKRYQQINREAVSEGKRPASGRPELMGITKASLATESWLSAASFQETTRVLTQAAMEGKRDPLVGLKENVIIGKLIPAGTGLTKYRDITVEATEEAKSERYPNRIFASDGAYADGDFGYVDFDAFSTDDITPGTYN*