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scnpilot_solids1_trim150_scaffold_2163_7

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: 3566..7648

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 999.99
  • Bit_score: 2121
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 999.99
  • Bit_score: 2117
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A943_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 999.99
  • Bit_score: 2117
  • Evalue 0.0

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Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4083
ATGGCACTCTCGTTCACGGGACGCAAAAGGCTTCGGAAATATTTCGGCAAAATGGTCGAAGTGGCCCAGATGCCGAACCTCATCGAGGTTCAGAAGACCTCGTATGACCAGTTTCTCCAGGTGGATAAGCCTGAGGCGGGCCGTTTGGACGAGGGGCTTCAGGCCGTCTTTTCCTCGGTGTTCCCGATCAAGGATTTCTCCGAATCCTCGCTTCTCGAATATGTGGATTACCACTTCGAGGAGCCGAAATATGATGTGGAGGAGTGTCAGCAGCGCTCGATGACCTTTGCCGCGCCGCTGAAGGTCACGCTGCGCCTGATCGTGTTCGATGTTGACCAGGAAACCGGCGCGAAGTCGGTGAAGGACATCAAGGAACAGGATGTCTATATGGGCGACATCCCGTTCATGACCGAGAACGGCACCTTCATCGTCAACGGAACCGAACGCGTCATCGTCAGCCAGATGCACCGTTCGCCGGGCGTGTTCTTCGATCACGACAAGGGCAAGACGCATTCGAGCGGCAAGCTTCTGTTCGCCGCCCGCGTCATTCCCTATCGCGGGTCGTGGCTCGACTTTGAATTCGATGCGAAGGACATCATTCACGTCCGCATCGACCGGCGCCGCAAATTGCCGGTCACCACGCTGCTTTATGCGCTGGGCCTGACCCAGGAAGACATCCTGGAACAGTTTTATTCCAAGATTGCCTTCAAGCACACCAAGGATGGCGGCTGGACCACGCCGGTCGATCCCAACTGGATGCGCAATGCCAAGGCGGTTGGCACATGGACCAATGCCAAGACCGGCGAAGTGCTGGTGGAGCCGGGGCAGAAGATTTCCGTTCGCGGCCTGCGCAAATGGCAGGAAGACGGCATCAAGCAGATTCAGGTTTCTGCGGAAGAACTCATGGGGCGTTTCTCGGCGCTCGATATGGTCAACCCGGAAACCGGCGAGATCTATGTCGAAGCCGGTGACGAACTGACGGCCGAAAATCTGGAACAATTGGTGGAAGCCCGCTTCCACGAAATCGATGTGATCAATGTCGATGGCATCTCTATCGGTGCCTATGTGCGCAACACGATGGCGGCTGACAAGAACCACAGCCGCGAACAGGCGCTGATCGACATCTACCGCGTCATGCGTCCGGGCGAACCGCCCACGCTGGATACTGCGGAAGCGCTGTTCAACCAGATGTTCTTCGACCCCGAGCGCTATGACCTGTCCAGCGTCGGCCGGGTGAAGATGAACATGCGCATGGGCCTCGATGCGCCCGACACGATGCGCGTGCTGCGCAAGGAAGACATCCTTGCCATCGTCAAGGCGCTGGCCGATCTGCGCGATGGCCGCGGCGAGGTGGACGACATCGACAATCTCGGCAACCGGCGTGTGCGTTCGGTGGGCGAGTTGATGGAGAACCAGTTCCGCGTCGGCCTTCTGCGTATGGAACGCGCGATCAAGGAGCGGATGAGCGCCGTCGATATCGACACGGTGATGCCGCACGACCTGATCAATGCGAAGCCGGTCGCGGCTGCGGTGCGCGAATTCTTCGGTTCGTCACAGCTTTCGCAGTTCATGGACCAGACCAATCCGCTGTCGGAAGTCACCCACAAGCGGCGCATGTCGGCGCTCGGGCCGGGCGGTCTGACGCGCGAGCGTGCGGGCTTTGAAGTGCGCGACGTGCACCCGACCCATTATGGCCGCATCTGCCCGATTGAAACGCCGGAAGGCCCGAATATCGGTCTGATCAATTCGCTCGCGACTTACGCGCGCGTCAACAAATACGGCTTCATCGAAAGCCCGTATCGCCGCGTGGTGGACCGCCGCGTGACCGATGAGGTGGTCTATCTCTCCGCGATGGAAGAGGCGAAATACACCATCGCCCAGGCCAACGCGACGATCGACACCAAGAACCGCATCCTGGACGAGCTGGTCTCCTGCCGCAAAGGCGGGGACTTCGTGATGACCACGCCCGACCAGGTGGAGTTCATCGACGTGTCGCCGAAGCAGCTTGTGTCTGTTGCGGCCGCGCTGGTGCCGTTTCTTGAAAACGACGACGCCAACCGCGCCCTGATGGGCTCGAACATGCAGCGCCAGGCCGTGCCGCTGTTGCAGCCGGAAGCGCCGCTGGTCGGCACCGGGCTGGAAGATGTGGTGGCGCGTGACTCCGGTTCCGCCATCGCGGCCCGCCGTGCCGGCGTGGTGGTGCAGATCGATGCCACCCGCATCGTGGTGCGCGCGACGGAGGAGATGGACCCGACCAAACCGGGGATCGACATCTATCGCCTGAAGAAGTTCCAGCGTTCGAACCAGTCCACCTGCATCAACCAGCGCCCGCTGGTGAAGGTTGGCGATCATGTCGCGAAGGGCGACATCATTGCCGATGGTCCTTCGACTCAGCTTGGCGAACTGGCGCTGGGCAAGAACGTGCTGGTCGCGTTCATGCCGTGGAATGGCTACAACTATGAAGACTCCATCCTGATCTCCGAACGCATCGTGCGCGACGACGTCTTCACCTCGATCCATATCGAGGAATTCGAGACCATGGCGCGCGATACGAAATTGGGGCCGGAGGAAATCACCCGCGACATTCCGAATGTCGGTGAAGAGTCGCTGAAGAATCTCGATGAAGCGGGCATCGTCTATATCGGTGCCGAGGTGCAGGCGGGCGATATTCTGGTGGGCAAGGTGACGCCGAAGGGCGAAACCCCGATGACACCGGAAGAGAAGCTGCTGCGCGCGATCTTCGGTGAAAAGGCCGCGGATGTGCGCGACACGTCCTTGCGCGTGCCGCCGGGCGTGACCGGTACCATCGTCGAGGTGCGCGTGTTCAACCGTCATGGCGTCGATAAGGATCAGCGCGCGATGGCGATCGAAAAGGCGGAGGAGGAGCGTCTGGCCGAAGACCGCGACGACGAACTCGCGATCCTCGAACGCAATATCTTCTCGCGCCTGTCGGAACTGTTGCTGAACAAGAACGCCAGTCACGGCCCCAAGAACATGGCGCCGGACACCAAGATCACGCAAAGCGTGCTCGACGCGATTCCGCGTCATCAGTGGTGGCAGATCGGTCTGCGCAACGAAAAGTCGAACGGCGAAATCGAAGCGCTGCGCAAGCAGTACGAAGATTCGCGCCAGCGTCTGGACAAGCGCTTTGCCGACAAGGTGGAGAAGCTGCGCCGCGGTGATGAACTGGCACCGGGCGTGATGAAGATGGTCAAGGTGTTCGTCGCGGTGAAGCGCAAGCTGCAACCGGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGTGTGATCAGCCGCATTCTTCCGATGGAAGACATGCCGCATCTGGAAGACGGCACGGCGGTGGACATCGTGCTGAACCCGCTGGGCGTGCCCAGCCGCATGAATGTCGGCCAGATTCTGGAAACCCATCTGGGCTGGGCCTGCGCCGGTCTTGGTAAACAGATCGGCGATGCGCTCGATCATGTGCGCCGGGATGGCAAGGGCGAGCCGCTGCGTCGCCTCTTGAAACAGGTCTATGACAATGACGAGCGGCTGGGCGAACTGGACGATCAGGGCATGATCGAAATGGGCGAAAACCTTCGCCCCGGCGTGCCGATCGCAACGCCCGTGTTCGATGGCGCCAAGGAACAGGACATCGTGGACATGCTGGCCGAAGCCGGCCTCAATTCCACGGGTCAGGTTACGCTGTTCGACGGCCGCACGGGCGAGGCGTTCAAGCGTCAGGTGACGGTGGGCTACATCTATATGCTGAAGCTGCACCATCTGGTGGACGACAAGATTCACGCCCGCTCCATCGGTCCGTATTCGCTGGTTACTCAGCAGCCGCTGGGCGGCAAGGCACAGTTCGGCGGCCAGCGCTTCGGTGAAATGGAAGTCTGGGCGCTTGAGGCTTACGGCGCGGCCTACACCTTGCAGGAAATCCTGACCGTGAAGTCCGACGACGTGGCCGGCCGTACCAAGGTCTATGAAGCCATCGTCCGCGGTGAGGACACGTTTGAAGCCGGTATCCCGGAATCCTTCAACGTGCTGGTGAAGGAAATGCGCTCACTGGGCCTGAATGTGGAGCTTGTGAACGGTTAG
PROTEIN sequence
Length: 1361
MALSFTGRKRLRKYFGKMVEVAQMPNLIEVQKTSYDQFLQVDKPEAGRLDEGLQAVFSSVFPIKDFSESSLLEYVDYHFEEPKYDVEECQQRSMTFAAPLKVTLRLIVFDVDQETGAKSVKDIKEQDVYMGDIPFMTENGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARVIPYRGSWLDFEFDAKDIIHVRIDRRRKLPVTTLLYALGLTQEDILEQFYSKIAFKHTKDGGWTTPVDPNWMRNAKAVGTWTNAKTGEVLVEPGQKISVRGLRKWQEDGIKQIQVSAEELMGRFSALDMVNPETGEIYVEAGDELTAENLEQLVEARFHEIDVINVDGISIGAYVRNTMAADKNHSREQALIDIYRVMRPGEPPTLDTAEALFNQMFFDPERYDLSSVGRVKMNMRMGLDAPDTMRVLRKEDILAIVKALADLRDGRGEVDDIDNLGNRRVRSVGELMENQFRVGLLRMERAIKERMSAVDIDTVMPHDLINAKPVAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRMSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATYARVNKYGFIESPYRRVVDRRVTDEVVYLSAMEEAKYTIAQANATIDTKNRILDELVSCRKGGDFVMTTPDQVEFIDVSPKQLVSVAAALVPFLENDDANRALMGSNMQRQAVPLLQPEAPLVGTGLEDVVARDSGSAIAARRAGVVVQIDATRIVVRATEEMDPTKPGIDIYRLKKFQRSNQSTCINQRPLVKVGDHVAKGDIIADGPSTQLGELALGKNVLVAFMPWNGYNYEDSILISERIVRDDVFTSIHIEEFETMARDTKLGPEEITRDIPNVGEESLKNLDEAGIVYIGAEVQAGDILVGKVTPKGETPMTPEEKLLRAIFGEKAADVRDTSLRVPPGVTGTIVEVRVFNRHGVDKDQRAMAIEKAEEERLAEDRDDELAILERNIFSRLSELLLNKNASHGPKNMAPDTKITQSVLDAIPRHQWWQIGLRNEKSNGEIEALRKQYEDSRQRLDKRFADKVEKLRRGDELAPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISRILPMEDMPHLEDGTAVDIVLNPLGVPSRMNVGQILETHLGWACAGLGKQIGDALDHVRRDGKGEPLRRLLKQVYDNDERLGELDDQGMIEMGENLRPGVPIATPVFDGAKEQDIVDMLAEAGLNSTGQVTLFDGRTGEAFKRQVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVAGRTKVYEAIVRGEDTFEAGIPESFNVLVKEMRSLGLNVELVNG*