ggKbase home page

scnpilot_solids1_trim150_scaffold_2163_8

Organism: SCNPILOT_SOLID_1_TRIM150_Alphaproteobacteria_62_14

partial RP 39 / 55 BSCG 36 / 51 ASCG 6 / 38
Location: 7763..9301

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 513.0
  • Bit_score: 916
  • Evalue 1.30e-263
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 513.0
  • Bit_score: 910
  • Evalue 2.00e-262
DNA-directed RNA polymerase subunit beta' n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RPOC_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 513.0
  • Bit_score: 910
  • Evalue 6.40e-262

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGAATCAAGAGCTGATGAATGCCTTCAAGCCGGCCAACGAACAGCCGGTCTTCGATCGCATCCGGATTTCGCTGGCCAGCCCGGATCAGATTCTGCGCTGGAGCCACGGCGAAATCAAAAAGCCGGAAACGATCAACTATCGTACCTTCAAGCCGGAGCGTGACGGCCTGTTCTGCGCCCGCATCTTCGGCCCGGTGAAGGATTACGAATGCTTGTGCGGCAAGTACAAGCGCATGAAGTACAAGGGCATCGTCTGCGAAAAATGCGGTGTCGAGGTCACGGTGCAGAAGGTGCGCCGTGAGCGCATGGGCCATATCGAACTGGCCTCGCCGGTCGCGCACATCTGGTTCCTGAAATCGCTGCCGTCGCGCATCGGCCTGATGCTGGACATGACGCTGAAGGATCTGGAGCGCGTTCTCTATTTCGAACAGTACGTCGTGATCGAGCCAGGCCTAACGCCGCTCAAGGATCGTCAGCTCCTGACGGAAGATGAGTATTACAAGGCGCAGGACGATTACGGTGAAGACAGCTTCACCGCGATGATCGGTGCCGAGGCCATTCGCACGCTGTTGATGGCGATCGACCTGGAGAAACTGCGCGACGATCTGCGCGCCGAAATCGCCACCTGCAACGGCGGTGAAAAGCCGAAGAAGCTGGTCAAGCGGCTGAAGGTGGTGGAGGCGTTCATTGAATCCGGCAACCGTCCGGAATGGATGATCCTGACCGTCGTGCCGGTGATCCCGCCGGAACTGCGGCCTCTGGTTCCTTTGGATGGGGGGCGCTTTGCCACCTCCGATCTGAACGATCTCTATCGCCGCGTCATCAACCGCAACAACCGCCTGAAGCGGCTGATCGAGTTGAAGGCGCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAATCCGTGGATGCGCTGTTCGACAATGGCCGCCGCGGCCGTGTCATCACCGGCGCCAACAAGCGGCCGCTGAAATCGCTCGCCGATATGCTGAAAGGCAAGCAGGGTCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGATTACTCCGGCCGTTCGGTGATCGTGGTCGGCCCGGAACTGAAGCTGCATCAATGCGGCCTGCCGAAGAAAATGGCGTTGGAGCTGTTCAAGCCGTTCATCTATGCCCGCCTTGAGGCCAAGGGCTTCAGCCAGACGGTGAAGCAATCCAAAAAGCTGGTGGAAAAGGAAAAGCCGGAAGTCTGGGATATCCTGGAAGAGGTGATCCGCGAACATCCGGTGCTGCTCAACCGCGCGCCGACCTTGCACCGCCTCGGCATTCAGGCGTTTGAGCCGGTGCTGATCGAAGGCAAGGCGATTCAGCTTCATCCGCTGGTCTGTACCGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCGGTACATGTGCCGTTGTCACTTGAGGCGCAGCTCGAAGCGCGCGTGCTGATGATGTCCACCAACAACATCCTCAGCCCCGCCAACGGCAAACCGATCATCGTGCCGACGCAGGATATCGTGCTCGGCCTCTAT
PROTEIN sequence
Length: 513
MNQELMNAFKPANEQPVFDRIRISLASPDQILRWSHGEIKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRMKYKGIVCEKCGVEVTVQKVRRERMGHIELASPVAHIWFLKSLPSRIGLMLDMTLKDLERVLYFEQYVVIEPGLTPLKDRQLLTEDEYYKAQDDYGEDSFTAMIGAEAIRTLLMAIDLEKLRDDLRAEIATCNGGEKPKKLVKRLKVVEAFIESGNRPEWMILTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELKAPDIIVRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYARLEAKGFSQTVKQSKKLVEKEKPEVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPTQDIVLGLY