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scnpilot_solids2_trim150_scaffold_207

Search features with annotation key words

Displaying items 151-180 of 239 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_207_151
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(151981..152694)
-----------------
DNA (714bp)
protein (238aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FBA102 rbh
VIT family protein {ECO:0000313|EMBL:KJL25144.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_207_152
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

152778..154091
-----------------
DNA (1314bp)
protein (438aa)
Oxygen sensor histidine kinase NreB {ECO:0000313|EMBL:KJL29996.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL29996.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CB5BD rbh
signal transduction histidine kinase rbh
scnpilot_solids2_trim150_scaffold_207_153
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

154079..154780
-----------------
DNA (702bp)
protein (234aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FA0301 rbh
Transcriptional regulatory protein DegU {ECO:0000313|EMBL:KJL29997.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
two-component system response regulator rbh
scnpilot_solids2_trim150_scaffold_207_154
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

154777..155571
-----------------
DNA (795bp)
protein (265aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000364AE0F
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_207_trna_1
unknown

Not on your lists

155687..155760
-----------------
DNA (74bp)
transferRNA Ile
scnpilot_solids2_trim150_scaffold_207_trna_2
unknown

Not on your lists

155798..155870
-----------------
DNA (73bp)
transferRNA Ala
scnpilot_solids2_trim150_scaffold_207_155
Corynebacterium casei, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

156052..156441
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=Corynebacterium casei UCMA 3821 RepID=G7HXM6_9CORY
Uncharacterized protein {ECO:0000313|EMBL:CCE54941.1}; TaxID=1110505 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium casei UCMA 3821.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_207_156
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(156466..157305)
-----------------
DNA (840bp)
protein (280aa)
hydrolase n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255F3E4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EFV91159.1}; TaxID=910954 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_207_157
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

157354..157812
-----------------
DNA (459bp)
protein (153aa)
MerR family transcriptional regulator n=1 Tax=Saccharomonospora saliphila RepID=UPI000373A6F8
Transcriptional regulator {ECO:0000313|EMBL:EWS81083.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
MerR family transcriptional regulator; K13639 MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
scnpilot_solids2_trim150_scaffold_207_158
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(157829..158026)
-----------------
DNA (198bp)
protein (66aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B5AD90
Uncharacterized protein {ECO:0000313|EMBL:KJL32353.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_207_159
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(158023..158619)
-----------------
DNA (597bp)
protein (199aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI0003716555
Uncharacterized protein {ECO:0000313|EMBL:KJL32354.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_207_160
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

158844..159974
-----------------
DNA (1131bp)
protein (377aa)
Serine-pyruvate aminotransferase n=1 Tax=Brevibacterium casei S18 RepID=K9AMU0_9MICO rbh
Class V aminotransferase {ECO:0000313|EMBL:KHK98560.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
class V aminotransferase rbh
scnpilot_solids2_trim150_scaffold_207_161
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

160058..160903
-----------------
DNA (846bp)
protein (282aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036A1D81 rbh
UspA domain-containing protein {ECO:0000313|EMBL:EZP29016.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
UspA domain-containing protein
scnpilot_solids2_trim150_scaffold_207_162
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(160911..161945)
-----------------
DNA (1035bp)
protein (345aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346F786 rbh
Dipeptidase {ECO:0000313|EMBL:EYT60677.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
metallopeptidase rbh
scnpilot_solids2_trim150_scaffold_207_163
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(162090..162545)
-----------------
DNA (456bp)
protein (152aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E8860D
Uncharacterized protein {ECO:0000313|EMBL:KJL25163.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_207_164
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

162637..163059
-----------------
DNA (423bp)
protein (141aa)
Nucleoside triphosphatase NudI {ECO:0000313|EMBL:KJQ52549.1}; EC=3.6.1.- {ECO:0000313|EMBL:KJQ52549.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K1G6_9MICO
ADP-ribose pyrophosphatase
scnpilot_solids2_trim150_scaffold_207_165
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(163085..163585)
-----------------
DNA (501bp)
protein (167aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK {ECO:0000313|EMBL:KJL30008.1}; EC=4.2.-.- {ECO:0000313|EMBL:KJL30008.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000380A1B9
hypothetical protein
scnpilot_solids2_trim150_scaffold_207_166
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(163588..164085)
-----------------
DNA (498bp)
protein (166aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EA50C3
Uncharacterized protein {ECO:0000313|EMBL:KJL22930.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
superfamily II DNA/RNA helicase, SNF2 family
scnpilot_solids2_trim150_scaffold_207_167
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

164224..164781
-----------------
DNA (558bp)
protein (186aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] rbh
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFU0_9MICO rbh
scnpilot_solids2_trim150_scaffold_207_168
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

164800..165681
-----------------
DNA (882bp)
protein (294aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EBBA25 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM73054.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
rhomboid family membrane protein
scnpilot_solids2_trim150_scaffold_207_169
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(166014..166253)
-----------------
DNA (240bp)
protein (80aa)
Cell division protein CrgA n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K1G2_9MICO
Cell division protein CrgA {ECO:0000256|HAMAP-Rule:MF_00631}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_207_170
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

166291..167082
-----------------
DNA (792bp)
protein (264aa)
sortase; K07284 sortase A [EC:3.4.22.70]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003786375 rbh
Sortase family protein {ECO:0000313|EMBL:KJL22934.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids2_trim150_scaffold_207_171
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

167097..167252
-----------------
DNA (156bp)
protein (52aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E9E243
Uncharacterized protein {ECO:0000313|EMBL:KJL30014.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_207_172
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

167249..167860
-----------------
DNA (612bp)
protein (204aa)
glutamine amidotransferase of anthranilate synthase (EC:4.1.3.27); K01664 para-aminobenzoate synthetase component II [EC:2.6.1.85]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A9A84
Contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89834.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids2_trim150_scaffold_207_173
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(167854..169554)
-----------------
DNA (1701bp)
protein (567aa)
Serine/threonine-protein kinase PknB {ECO:0000313|EMBL:KJQ52540.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KJQ52540.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000373433A rbh
scnpilot_solids2_trim150_scaffold_207_174
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(169615..171381)
-----------------
DNA (1767bp)
protein (589aa)
Serine/threonine-protein kinase PknA {ECO:0000313|EMBL:KJL30017.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KJL30017.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
pknA; serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K1F8_9MICO rbh
scnpilot_solids2_trim150_scaffold_207_175
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(171378..172838)
-----------------
DNA (1461bp)
protein (487aa)
cell division protein FtsI/penicillin-binding protein 2; K05364 peptidoglycan glycosyltransferase [EC:2.4.1.129] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBT6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM73047.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids2_trim150_scaffold_207_176
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(172835..174217)
-----------------
DNA (1383bp)
protein (461aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDU3_9MICO rbh
Cell division protein FtsW {ECO:0000313|EMBL:KDA05157.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ftsW; bacterial cell division membrane protein rbh
scnpilot_solids2_trim150_scaffold_207_177
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(174214..175518)
-----------------
DNA (1305bp)
protein (435aa)
PP2C-family Ser/Thr phosphatase {ECO:0000313|EMBL:KJL30020.1}; EC=3.1.3.16 {ECO:0000313|EMBL:KJL30020.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
serine/threonine protein phosphatase; K01090 protein phosphatase [EC:3.1.3.16]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000308B9C5 rbh
scnpilot_solids2_trim150_scaffold_207_178
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(175532..176029)
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KB23_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM73044.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
FHA domain
Displaying items 151-180 of 239 in total

View Taxonomy