ggKbase home page

scnpilot_solids2_trim150_scaffold_207

Search features with annotation key words

Displaying items 181-210 of 239 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_207_179
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(176026..176688)
-----------------
DNA (663bp)
protein (221aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000308051C rbh
FHA domain-containing protein FhaA {ECO:0000313|EMBL:KJL30022.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
FHA domain
scnpilot_solids2_trim150_scaffold_207_trna_3
unknown

Not on your lists

176930..177013
-----------------
DNA (84bp)
transferRNA Leu
scnpilot_solids2_trim150_scaffold_207_180
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(177044..178327)
-----------------
DNA (1284bp)
protein (428aa)
hypothetical protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B6D4FC rbh
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EZP32903.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
int; site-specific recombinase rbh
scnpilot_solids2_trim150_scaffold_207_181
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(178380..178973)
-----------------
DNA (594bp)
protein (198aa)
DNA-binding protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B6657C
Uncharacterized protein {ECO:0000313|EMBL:CDP48112.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_207_182
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

179072..179296
-----------------
DNA (225bp)
protein (75aa)
hypothetical protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B39C8C
DNA binding domain, excisionase family {ECO:0000313|EMBL:EZP32905.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
scnpilot_solids2_trim150_scaffold_207_183
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

179409..179615
-----------------
DNA (207bp)
protein (69aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6X8K6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB95154.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
scnpilot_solids2_trim150_scaffold_207_184
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

179632..180420
-----------------
DNA (789bp)
protein (263aa)
cell filamentation protein n=1 Tax=Humibacter albus RepID=UPI0003B49E93
Uncharacterized protein {ECO:0000313|EMBL:GAB95155.1}; Flags: Fragment;; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
LuxR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_207_185
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(180469..183921)
-----------------
DNA (3453bp)
protein (1151aa)
TrwC relaxase n=1 Tax=Nesterenkonia alba RepID=UPI0003B656A5 rbh
Putative TraA {ECO:0000313|EMBL:EZP32908.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
TrwC relaxase rbh
scnpilot_solids2_trim150_scaffold_207_186
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(184257..184601)
-----------------
DNA (345bp)
protein (115aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P5G1_LEIXC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW41550.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_solids2_trim150_scaffold_207_187
Corynebacterium terpenotabidum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

184674..184859
-----------------
DNA (186bp)
protein (62aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI0003460C16
Uncharacterized protein {ECO:0000313|EMBL:AGP30761.1}; TaxID=1200352 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium terpenotabidum Y-11.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_207_188
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

184886..185260
-----------------
DNA (375bp)
protein (125aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000344D895
Uncharacterized protein {ECO:0000313|EMBL:ERG64431.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
thioredoxin
scnpilot_solids2_trim150_scaffold_207_189
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

185468..186886
-----------------
DNA (1419bp)
protein (473aa)
Zn-dependent hydrolase n=1 Tax=Leucobacter salsicius RepID=UPI00034762B7 rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
thiosulfate sulfurtransferase rbh
scnpilot_solids2_trim150_scaffold_207_190
Gordonia hirsuta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

186908..187699
-----------------
DNA (792bp)
protein (264aa)
Uncharacterized protein n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7LAL9_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC57801.1}; TaxID=1121927 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
hypothetical protein; K07090 rbh
scnpilot_solids2_trim150_scaffold_207_191
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

187717..188337
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000381C9AD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG75752.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
scnpilot_solids2_trim150_scaffold_207_192
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

188352..188732
-----------------
DNA (381bp)
protein (127aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003784A39
Rhodanese {ECO:0000313|EMBL:EYT56230.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
rhodanese domain-containing protein
scnpilot_solids2_trim150_scaffold_207_193
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

189519..189725
-----------------
DNA (207bp)
protein (69aa)
Cold-shock protein n=2 Tax=Microbacteriaceae RepID=T5KDR2_9MICO
Putative cold shock protein A {ECO:0000313|EMBL:KJQ52476.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
csp; cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family)
scnpilot_solids2_trim150_scaffold_207_194
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(189794..191116)
-----------------
DNA (1323bp)
protein (441aa)
Uncharacterized protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7F4E8_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:KHL00055.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_207_195
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(191163..191582)
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7F4K7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KHL00054.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
scnpilot_solids2_trim150_scaffold_207_196
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(191654..192313)
-----------------
DNA (660bp)
protein (220aa)
phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
phosphatase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FE277
Leucobacter komagatae strain VKM ST2845 L_komagatae_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51629.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
scnpilot_solids2_trim150_scaffold_207_197
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(192385..193080)
-----------------
DNA (696bp)
protein (232aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
endonuclease n=1 Tax=Microbacterium barkeri RepID=UPI000305F11E rbh
nuclease of the RecB family; K07503 hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_207_198
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(193090..194313)
-----------------
DNA (1224bp)
protein (408aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034ADA26 rbh
MFS transporter permease {ECO:0000313|EMBL:EYT60716.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
permease of the major facilitator superfamily rbh
scnpilot_solids2_trim150_scaffold_207_199
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

194373..195446
-----------------
DNA (1074bp)
protein (358aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KK54_9MICO rbh
HTH-type transcriptional repressor CytR {ECO:0000313|EMBL:KJL26963.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_207_200
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(195467..197062)
-----------------
DNA (1596bp)
protein (532aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380892D rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL26964.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_207_201
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

197261..200215
-----------------
DNA (2955bp)
protein (985aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFY8_9MICO rbh
Na(+)/H(+) antiporter subunit A {ECO:0000313|EMBL:KJL26966.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; K05565 multicomponent Na+:H+ antiporter subunit A rbh
scnpilot_solids2_trim150_scaffold_207_202
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

200215..200778
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344C70B
multisubunit Na+/H+ antiporter, MnhC subunit; K05567 multicomponent Na+:H+ antiporter subunit C
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_207_203
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

200775..202328
-----------------
DNA (1554bp)
protein (518aa)
cation:proton antiporter n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034902AD rbh
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; K05568 multicomponent Na+:H+ antiporter subunit D rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_207_204
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

202325..202912
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EFB649
Sodium:proton antiporter {ECO:0000313|EMBL:KDA05167.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
multisubunit Na+/H+ antiporter, MnhE subunit; K05569 multicomponent Na+:H+ antiporter subunit E
scnpilot_solids2_trim150_scaffold_207_205
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

202909..203181
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI47_9MICO
Putative monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:KJL26970.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
multisubunit Na+/H+ antiporter, MnhF subunit; K05570 multicomponent Na+:H+ antiporter subunit F
scnpilot_solids2_trim150_scaffold_207_206
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

203178..203570
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DB32D
Na(+)/H(+) antiporter subunit G {ECO:0000313|EMBL:KJL25261.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
multisubunit Na+/H+ antiporter, MnhG subunit; K05571 multicomponent Na+:H+ antiporter subunit G
scnpilot_solids2_trim150_scaffold_207_207
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

203861..204895
-----------------
DNA (1035bp)
protein (345aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XCH7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL26752.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
Displaying items 181-210 of 239 in total

View Taxonomy