ggKbase home page

scnpilot_solids2_trim150_scaffold_244_42

Organism: SCNPILOT_SOLID2_TRIM150_Microbacterium_69_27

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 40772..42397

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Nocardiopsis halophila RepID=UPI00034C657D similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 530.0
  • Bit_score: 826
  • Evalue 1.30e-236
  • rbh
Putative drug resistance transporter {ECO:0000313|EMBL:GAC59184.1}; TaxID=1223544 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sihwensis NBRC 108236.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 529.0
  • Bit_score: 797
  • Evalue 1.50e-227
drug resistance efflux protein similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 531.0
  • Bit_score: 710
  • Evalue 5.50e-202
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gordonia sihwensis → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1626
ATGACGAAGGACCGGGACGCGGAGATCGCGCCGACCAGGCGGGACTGGCTGGGCCTCGCCGTGCTGTCGATCGGACTGGGACTGATCGTGCTGGACGGCACCATCGTGGGCGTCGCGCTGCCGGTCATCATCGGCGAGCTGAAGCTGAACATCACCGACGCGCAGTGGGTCAACAGCCTGTACGCCGTGCTGCTGGCGGCGCTGCTGCTGTCCACCGGGAGCCTGGCCGATCGGTGGGGTCGCAAGCGGCTGCTCCTCGCCGGACTCGTGGTGTTCATGGGCGGCAGCCTGCTGGCGGCCATGTCGGCCACAGCCGGCGCGCTGATCGGGGCGCGAGCGGTGCAGGCCGTCGGCGCGGCGTTCATCATGCCGTCCACGCTGTCCACGGTCAACGCCGTGTTCCGCGGGCGGCACCGCGCCACGGCATTCGGCGTGTGGGGTGCGGTGATCTCCGGGGCGGCGGCCATCGGCCCGCTGGCCGGCGGGGCGCTGACGCAGTGGGCGTCGTGGCACTGGATCTTCCTGGTGAACCTGCCGTTGGGTGCGCTGGTGCTGATCGCCGCGCTGTTCACCGTGCGCGAGACCCGCGGCGAGAAGACCCGCCCCGGCATGGACGTCGACGGCGCCCTGCTCAGCGCCATCGGCTTCGGTGCGCTGGTGTTCGCCGTCATCGAGGGCCCCGATCTGGGCTGGTGGACGCCGAAGGCCGACCTGGTCGCGTTCGGCTGGACGTGGGGGAAGGATGCTCCGATCTCGGCCGTGCCCGCGGCCTTCGCCGTCGCCGCGGTGGCCCTGGTGCTCTTCGTGATCTGGGAGCGCCACCGTGAGAAGGTGCAGCGCCAGGCGCTGCTGGATCTCGGACTGTTCTCGCTGTCCACGTTCTCGTGGGGCAACCTCACGGCCGGGATGGTGGCCGTCGGCGAGTTCGCGCTGCTGTTCGTGCTGCCGCTGTACCTGGTCAACGCGCTGGGGCTGGACGTCATGGGCGCCGGACTCGTACTGGCAGGCATGGCGCTGGGCGCGTTCGTCTCCGGCGCGGGCGCTCGACACCTGGCGATGCGGTTCGGCGCCCCCGGAGCGGTGCTCATCGGCTTGGGGCTCGAGGTGGCCAGTGCGCTCGCGCTGACGTTCACGGTGCAGGGCGACACCTCGGGCTGGGTGATCGTCATCCCGCTGGTGTTCTACGGACTGGGCCTGGGGCTGGCATCCGCTCAGCTGACCGGCACCGTGCTGCGGGATGTGCCCGTGTCGATCTCCGGGCAGGGATCAGCCACGCAGAGCACCGTGCGGCAGGTCGGCTCCGCACTCGGCACGGCATTCGCGGGAGCCGCCCTCTCGGTGGCGCTGGCCGTCACGCTTCCCGCCGCGCTGTCGAATGCGGGCATCTCGGGTCCGAACGCCGACAGCATCGCCGACTCCACGCGGCTGTCCGCCGGGACCACCATCACCCAGCTGCGTGCACAGGGCGTGCACTCCCCGCTCGGCGATCACACGCAGGCCACCGTCGACGCGCTGTCGGCGGGTTTCGCGGATGCCACGCGCTGGTCGCTGCTGGTGGCGGTGGCGTTCCTGGCGCTGGGCCTGGTCAGCGCGATGCTGCTGAGGAGAAGCTCGCGGGAGGGCTGA
PROTEIN sequence
Length: 542
MTKDRDAEIAPTRRDWLGLAVLSIGLGLIVLDGTIVGVALPVIIGELKLNITDAQWVNSLYAVLLAALLLSTGSLADRWGRKRLLLAGLVVFMGGSLLAAMSATAGALIGARAVQAVGAAFIMPSTLSTVNAVFRGRHRATAFGVWGAVISGAAAIGPLAGGALTQWASWHWIFLVNLPLGALVLIAALFTVRETRGEKTRPGMDVDGALLSAIGFGALVFAVIEGPDLGWWTPKADLVAFGWTWGKDAPISAVPAAFAVAAVALVLFVIWERHREKVQRQALLDLGLFSLSTFSWGNLTAGMVAVGEFALLFVLPLYLVNALGLDVMGAGLVLAGMALGAFVSGAGARHLAMRFGAPGAVLIGLGLEVASALALTFTVQGDTSGWVIVIPLVFYGLGLGLASAQLTGTVLRDVPVSISGQGSATQSTVRQVGSALGTAFAGAALSVALAVTLPAALSNAGISGPNADSIADSTRLSAGTTITQLRAQGVHSPLGDHTQATVDALSAGFADATRWSLLVAVAFLALGLVSAMLLRRSSREG*