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scnpilot_solids2_trim150_scaffold_4700_9

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(7742..9019)

Top 3 Functional Annotations

Value Algorithm Source
fucose permease n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B37BAA similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 423.0
  • Bit_score: 369
  • Evalue 3.40e-99
  • rbh
Major facilitator transporter {ECO:0000313|EMBL:EON24520.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 406.0
  • Bit_score: 263
  • Evalue 6.30e-67
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 414.0
  • Bit_score: 252
  • Evalue 2.50e-64

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
GTGAGCACGTCTTCCGCATCCCGACGCCGACCGAACGGCGCCGCTGACCGCACCCAGCGCCCGAACACCATCGCCGTGGCGGCGGTTGCCGTCACCTTCGCCGCAAGCGGTCTGATCATGGCGTCGGCGGTGTCCCGGATGCCGGAGATCAAGGCCCAGGTCGGGGCCACCGCCACCGAACTCGCGTTCGCGCTGGTCTGCGTCGGCATCGGCTCGATCGTGGCGATGCCATTCGCCGGCCGGCTGGTGAACCGCTTCGGCACGGCGCGCGTGGTGGGCGTCTTCACCACCATCGCGGCCACCGGCTGGTCGCTGATCCCGCTCGCCCGGTCGGTGCCGGAACTCGCCGCGATCCTGTTCCTCACCGGCGTCGGTGTGGGCACCTGGGACGTCGGCATGAACGTGCAGGGCTCCATCGTGGAGCGGACGCGTGGGCAGGTCCTGATGCCGCTGTGGCATGGGCTGTTCTCGGTCGGCGCCGTGTTCGGCGCGCTGATCGGCGCGGGCGCCGCGAAGTGGGGCGTCACGCTCGGCTGGCAGCTGCCGGTGCTGTCCGGCCTGCTGTGGGCCGCGACGATCGCCGCGTGCCTGGTGTACCTGCCGAATCCGGCGAGCGACACGGTGGTGGCCAGCAGCGACGCCCCTGTCGTGAGTACCGCCGAGCAGGCCGCCACGACCGCCCGGACCCGGAGACGCCGCGTCCGAGTCACCCCGCTGGAACTGCTGCTCGGTCTGATCATGCTGTCCACCGCGCTCGGCGAGGGCGCCGCCAACGACTGGCTGGCCGTCGCGCTGGTCGACGAACGCGGAGCACCCGCCGCGTTCGGGGCTCTGGCGCTGGCCGGCTTCAACGTGACGATGGCCATCGGCCGGTTCGCCGGCGGCCCGCTGATCGCCCGGTTCGGCCGGACGCGGTCGCTGCGCGCCGCCGGGTCCGTCGCCGCGATCGGCATACTGACCCTGTGCCTGATCCCGGACACGACGGCGGCGTTGCTGGGTGCGGCGGCCTGGGGACTCGGTCTGGCCATCGTCTTCCCGTCCGCGGTCTCCGCAGCGGGCGAGATCCCGGGCCGGGCCTCGCACGCCATCGCCAACGTCTCCACGATCGGGTACGGCGGATTCCTGTTCGGCGCCCCACTGATCGGCACCCTCGCGCACGCGATCCCGCTGATGGACGCCCTGCTGGTGGTGGCGGCGTTCGCCATCCTGATCGTGGTGCTCGCACCGGCTGCCCGGGAGCGCCGGGCGCCGGGCGTCGGCCTGGCCGCCACGCGGTGA
PROTEIN sequence
Length: 426
VSTSSASRRRPNGAADRTQRPNTIAVAAVAVTFAASGLIMASAVSRMPEIKAQVGATATELAFALVCVGIGSIVAMPFAGRLVNRFGTARVVGVFTTIAATGWSLIPLARSVPELAAILFLTGVGVGTWDVGMNVQGSIVERTRGQVLMPLWHGLFSVGAVFGALIGAGAAKWGVTLGWQLPVLSGLLWAATIAACLVYLPNPASDTVVASSDAPVVSTAEQAATTARTRRRRVRVTPLELLLGLIMLSTALGEGAANDWLAVALVDERGAPAAFGALALAGFNVTMAIGRFAGGPLIARFGRTRSLRAAGSVAAIGILTLCLIPDTTAALLGAAAWGLGLAIVFPSAVSAAGEIPGRASHAIANVSTIGYGGFLFGAPLIGTLAHAIPLMDALLVVAAFAILIVVLAPAARERRAPGVGLAATR*