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scnpilot_solids1_trim150_scaffold_1760_5

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(4284..4892)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 201.0
  • Bit_score: 349
  • Evalue 3.00e-93
RNA polymerase, sigma-24 subunit, RpoE similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 201.0
  • Bit_score: 349
  • Evalue 9.30e-94
RNA polymerase, sigma-24 subunit, RpoE {ECO:0000313|EMBL:AGG89348.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 201.0
  • Bit_score: 349
  • Evalue 4.10e-93

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGAGACGGCCCGCGTGGGTGAAAACGAGCTCGACCAGATGCTGGTCGAGCGTGTGCAGCAGGGGGACAGGCGGGCATTTGACCTCCTCGTGCGCAAATACCAGCACAAGGTGATCGGGCTGATTTCACGCTATGTCAGGAACCGCGCCGAGTGCGAGGACATTGCCCAGGAATCGTTCATGCGCGCCTGGCGTGCCATTGCCACCTTCCGCGGCGACAGCGCGTTTTATACGTGGCTGTACAAGATCGCCGTGAACACGGCCAAAAACCACCTGGTGGCGATGAAACGTCGTCCGCCGGCGGACGACGTGGACATCGATGAGGCCAGTTTCATGGTCGGTGCCGAGCGCATGCAGGACAACGCCACGCCCGAACATGAAATGATGCGCCAGGAAATTGAACAATCCGTATTTTCCACTGTCCAAGAGCTGCCCGAAGAACTGCGTACCGCCATTACCCTGCGGGAAGTGGACGGTCTCAGTTATGAGGAAATAGCCCAGGCAATGGATTGCCCGATCGGTACCGTGCGCTCGCGCATCTTTCGGGCACGCGAGGCAATTGACCAGAAATTGCGACCCCTGCTGTCGAATCGTGAGGAACAAGCATGA
PROTEIN sequence
Length: 203
METARVGENELDQMLVERVQQGDRRAFDLLVRKYQHKVIGLISRYVRNRAECEDIAQESFMRAWRAIATFRGDSAFYTWLYKIAVNTAKNHLVAMKRRPPADDVDIDEASFMVGAERMQDNATPEHEMMRQEIEQSVFSTVQELPEELRTAITLREVDGLSYEEIAQAMDCPIGTVRSRIFRAREAIDQKLRPLLSNREEQA*