ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Curated version: solids_Flavobacteriales_1

Properties

Avg. coverage: 3.98 Longest contig: 8.96 Kbp Bin length: 1.35 Mbp GC content: 39.55 %

Contigs count: 814 Features count: 1745 rRNAs count: 0 tRNAs count: 8

Genome completeness

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38

Displaying items 551-600 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_34898 Species: Elizabethkingia miricola (50%)	2	1181 bp	32.60	3.68	55.63
scnpilot_solids1_trim150_scaffold_9786 Species: Flavobacterium sp. 316 (50%)	2	2934 bp	37.01	5.11	89.16
scnpilot_solids1_trim150_scaffold_18146 Species: Chryseobacterium solincola (50%)	2	1883 bp	40.04	3.03	88.90
scnpilot_solids1_trim150_scaffold_42060 Species: Capnocytophaga canimorsus (50%)	2	1028 bp	45.53	2.92	73.83
scnpilot_solids1_trim150_scaffold_16781 Species: R_Fluviicola_43_260 (50%)	2	1990 bp	36.93	3.62	99.65
scnpilot_solids1_trim150_scaffold_39885 Species: Flavobacteriaceae bacterium 3519-10 (50%)	2	1069 bp	36.48	2.81	100.19
scnpilot_solids1_trim150_scaffold_6686 Species: Weeksella virosa (50%)	2	3884 bp	37.00	4.52	99.79
scnpilot_solids1_trim150_scaffold_28894 Species: Chryseobacterium jeonii (50%)	2	1352 bp	36.32	3.55	90.53
scnpilot_solids1_trim150_scaffold_32673 Species: Fluviicola taffensis (100%)	2	1238 bp	42.49	3.03	99.84
scnpilot_solids1_trim150_scaffold_31257 Species: Chryseobacterium formosense (50%)	2	1279 bp	33.07	3.28	99.22
scnpilot_solids1_trim150_scaffold_13442 Species: Elizabethkingia anophelis (50%)	2	2337 bp	36.20	4.36	99.36
scnpilot_solids1_trim150_scaffold_37883 Species: Joostella marina (50%)	2	1111 bp	39.24	3.11	99.64
scnpilot_solids1_trim150_scaffold_17203 Species: R_Fluviicola_43_260 (50%)	2	1957 bp	40.83	3.07	76.19
scnpilot_solids1_trim150_scaffold_36227 Species: Flavobacterium subsaxonicum (50%)	2	1148 bp	36.67	4.57	98.00
scnpilot_solids1_trim150_scaffold_40556 Species: Flavobacterium sp. F52 (50%)	2	1057 bp	33.68	3.41	70.10
scnpilot_solids1_trim150_scaffold_38404 Species: Chryseobacterium piperi (50%)	2	1100 bp	42.09	4.64	62.73
scnpilot_solids1_trim150_scaffold_36228 Species: Nonlabens ulvanivorans (50%)	2	1148 bp	40.85	3.92	86.76
scnpilot_solids1_trim150_scaffold_20621 Species: R_Fluviicola_43_260 (50%)	2	1724 bp	32.83	3.48	95.36
scnpilot_solids1_trim150_scaffold_22965 Species: R_Fluviicola_43_260 (50%)	2	1598 bp	39.55	3.00	91.24
scnpilot_solids1_trim150_scaffold_32678 Species: Flavobacterium suncheonense (50%)	2	1238 bp	46.61	3.39	97.90
scnpilot_solids1_trim150_scaffold_39895 Species: Flavobacterium sp. AED (100%)	2	1069 bp	38.54	4.21	100.47
scnpilot_solids1_trim150_scaffold_31008 Species: Aequorivita sublithincola (50%)	2	2149 bp	46.95	3.28	54.44
scnpilot_solids1_trim150_scaffold_22713 Species: R_Fluviicola_43_260 (50%)	2	1610 bp	44.04	3.35	93.73
scnpilot_solids1_trim150_scaffold_21809 Species: Flavobacterium sp. MEB061 (50%)	2	1656 bp	38.83	3.99	97.64
scnpilot_solids1_trim150_scaffold_42588 Species: R_Fluviicola_43_260 (50%)	2	1019 bp	36.51	2.80	90.97
scnpilot_solids1_trim150_scaffold_24564 Species: Chryseobacterium luteum (50%)	2	1521 bp	47.73	3.25	94.28
scnpilot_solids1_trim150_scaffold_27636 Species: Fluviicola taffensis (50%)	2	1397 bp	40.01	4.29	90.19
scnpilot_solids1_trim150_scaffold_27892 Species: Cellulophaga geojensis (50%)	2	1388 bp	38.69	4.54	95.53
scnpilot_solids1_trim150_scaffold_32685 Species: Fluviicola taffensis (50%)	2	1237 bp	40.50	3.40	84.64
scnpilot_solids1_trim150_scaffold_33744 Species: Chryseobacterium formosense (50%)	2	1209 bp	39.45	2.73	100.00
scnpilot_solids1_trim150_scaffold_26217 Species: Flavobacterium sp. 316 (50%)	2	1453 bp	45.97	2.99	97.25
scnpilot_solids1_trim150_scaffold_34921 Species: Myroides odoratus (50%)	2	1180 bp	31.61	5.85	53.39
scnpilot_solids1_trim150_scaffold_33745 Species: Chryseobacterium antarcticum (50%)	2	1209 bp	39.70	2.23	87.84
scnpilot_solids1_trim150_scaffold_35619 Species: Elizabethkingia meningoseptica (50%)	2	1162 bp	34.60	4.39	86.75
scnpilot_solids1_trim150_scaffold_22723 Species: Elizabethkingia anophelis (50%)	2	1609 bp	38.91	4.85	63.02
scnpilot_solids1_trim150_scaffold_38932 Species: Flavobacteriales bacterium BRH_c54 (50%)	2	1090 bp	35.87	2.20	61.10
scnpilot_solids1_trim150_scaffold_24573 Species: R_Fluviicola_43_260 (50%)	2	1520 bp	35.86	3.36	94.14
scnpilot_solids1_trim150_scaffold_36501 Species: Elizabethkingia miricola (50%)	2	1142 bp	39.40	2.89	100.61
scnpilot_solids1_trim150_scaffold_35366 Species: Chryseobacterium soli (50%)	2	1169 bp	40.63	2.82	94.95
scnpilot_solids1_trim150_scaffold_20382 Species: Chryseobacterium antarcticum (50%)	2	1739 bp	39.10	4.74	79.53
scnpilot_solids1_trim150_scaffold_24318 Species: Elizabethkingia meningoseptica (50%)	2	1531 bp	44.61	3.72	99.15
scnpilot_solids1_trim150_scaffold_29327 Species: R_Fluviicola_43_260 (50%)	2	1339 bp	38.16	3.02	92.53
scnpilot_solids1_trim150_scaffold_43664 Species: Flavobacterium psychrophilum (50%)	2	1001 bp	38.86	4.20	92.91
scnpilot_solids1_trim150_scaffold_19512 Species: Chryseobacterium solincola (50%)	2	1791 bp	47.63	3.18	86.60
scnpilot_solids1_trim150_scaffold_18688 Species: R_Fluviicola_43_260 (50%)	2	1844 bp	41.49	2.93	99.57
scnpilot_solids1_trim150_scaffold_33756 Species: R_Fluviicola_43_260 (100%)	1	1209 bp	42.68	2.98	99.75
scnpilot_solids1_trim150_scaffold_40837 Species: Flavobacterium enshiense (100%)	1	1051 bp	45.86	3.43	63.08
scnpilot_solids1_trim150_scaffold_39150 Species: Flavobacterium enshiense (100%)	1	1085 bp	43.50	4.01	99.82
scnpilot_solids1_trim150_scaffold_17999 Species: R_Fluviicola_43_260 (100%)	1	1894 bp	40.18	5.07	99.79
scnpilot_solids1_trim150_scaffold_36511 Species: Flavobacterium sp. EM1308 (100%)	1	1142 bp	42.21	4.47	66.73

Displaying items 551-600 of 814 in total

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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