ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Curated version: solids_Flavobacteriales_1

Properties

Avg. coverage: 3.98 Longest contig: 8.96 Kbp Bin length: 1.35 Mbp GC content: 39.55 %

Contigs count: 814 Features count: 1745 rRNAs count: 0 tRNAs count: 8

Genome completeness

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38

Displaying items 501-550 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_27077 Species: Flavobacterium sp. MEB061 (50%)	2	1419 bp	49.05	2.96	99.15
scnpilot_solids1_trim150_scaffold_29781 Species: Fluviicola taffensis (100%)	2	1324 bp	35.12	3.97	63.90
scnpilot_solids1_trim150_scaffold_22413 Species: Weeksella virosa (50%)	2	1625 bp	38.46	5.91	95.63
scnpilot_solids1_trim150_scaffold_29016 Species: Chryseobacterium gleum (50%)	2	2059 bp	37.69	2.84	59.01
scnpilot_solids1_trim150_scaffold_29529 Species: R_Fluviicola_43_260 (50%)	2	1333 bp	42.91	2.93	95.20
scnpilot_solids1_trim150_scaffold_25466 Species: Flavobacterium cauense (50%)	2	1484 bp	36.12	3.64	94.81
scnpilot_solids1_trim150_scaffold_24267 Species: Capnocytophaga cynodegmi (50%)	2	1534 bp	46.87	3.52	92.50
scnpilot_solids1_trim150_scaffold_35572 Species: Galbibacter marinus (50%)	2	1164 bp	34.79	3.87	88.66
scnpilot_solids1_trim150_scaffold_37596 Species: Fluviicola taffensis (50%)	2	1117 bp	42.44	3.22	99.64
scnpilot_solids1_trim150_scaffold_27340 Species: Flavobacteriales bacterium BRH_c54 (50%)	2	1409 bp	41.94	4.68	99.65
scnpilot_solids1_trim150_scaffold_31740 Species: Formosa sp. AK20 (50%)	2	1264 bp	37.90	4.75	87.58
scnpilot_solids1_trim150_scaffold_31996 Species: Flavobacterium sp. AED (50%)	2	1257 bp	39.14	3.34	98.09
scnpilot_solids1_trim150_scaffold_31229 Species: Elizabethkingia meningoseptica (50%)	2	1279 bp	34.64	3.28	95.00
scnpilot_solids1_trim150_scaffold_33445 Species: Flavobacterium beibuense (50%)	2	1217 bp	40.35	3.08	96.88
scnpilot_solids1_trim150_scaffold_25725 Species: Flavobacterium subsaxonicum (50%)	2	1473 bp	45.35	3.56	84.52
scnpilot_solids1_trim150_scaffold_29790 Species: Flavobacterium enshiense (50%)	2	1324 bp	42.52	3.40	82.02
scnpilot_solids1_trim150_scaffold_28614 Species: Weeksella virosa (50%)	2	1362 bp	45.59	2.64	103.74
scnpilot_solids1_trim150_scaffold_37599 Species: Nonlabens ulvanivorans (50%)	2	1117 bp	39.93	3.22	100.18
scnpilot_solids1_trim150_scaffold_27599 Species: R_Fluviicola_43_260 (50%)	2	1398 bp	40.13	2.25	83.05
scnpilot_solids1_trim150_scaffold_32903 Species: Flavobacterium beibuense (50%)	2	1231 bp	39.07	3.05	67.99
scnpilot_solids1_trim150_scaffold_7399 Species: Formosa sp. AK20 (50%)	2	3608 bp	38.80	4.03	95.79
scnpilot_solids1_trim150_scaffold_77019 Species: Flavobacteriaceae bacterium 3519-10 (50%)	2	1255 bp	39.20	2.39	78.41
scnpilot_solids1_trim150_scaffold_37858 Species: R_Fluviicola_43_260 (100%)	2	1112 bp	39.93	2.70	99.55
scnpilot_solids1_trim150_scaffold_11307 Species: Fluviicola taffensis (50%)	2	2642 bp	40.65	3.24	94.02
scnpilot_solids1_trim150_scaffold_20596 Species: Fluviicola taffensis (50%)	2	1725 bp	37.91	4.78	100.17
scnpilot_solids1_trim150_scaffold_43364 Species: Chryseobacterium luteum (50%)	2	1006 bp	42.54	2.09	95.43
scnpilot_solids1_trim150_scaffold_18388 Species: Fluviicola taffensis (50%)	2	1866 bp	32.26	3.86	74.92
scnpilot_solids1_trim150_scaffold_41757 Species: Chryseobacterium indologenes (50%)	2	1033 bp	36.30	2.03	70.86
scnpilot_solids1_trim150_scaffold_39102 Species: Flavobacterium frigoris (50%)	2	1086 bp	43.83	2.49	74.31
scnpilot_solids1_trim150_scaffold_36974 Species: R_Fluviicola_43_260 (50%)	2	1132 bp	40.19	1.59	86.66
scnpilot_solids1_trim150_scaffold_35327 Species: R_Fluviicola_43_260 (100%)	2	1170 bp	37.35	3.08	89.74
scnpilot_solids1_trim150_scaffold_19983 Species: Myroides profundi (50%)	2	1763 bp	40.56	3.40	100.06
scnpilot_solids1_trim150_scaffold_29799 Species: Flavobacterium subsaxonicum (50%)	2	1323 bp	40.67	2.95	85.71
scnpilot_solids1_trim150_scaffold_39103 Species: Chryseobacterium formosense (50%)	2	1086 bp	42.08	3.04	91.44
scnpilot_solids1_trim150_scaffold_38383 Species: R_Fluviicola_43_260 (50%)	2	1101 bp	41.05	2.45	91.83
scnpilot_solids1_trim150_scaffold_37608 Species: Flavobacteriaceae bacterium 3519-10 (50%)	2	1117 bp	42.08	2.95	99.37
scnpilot_solids1_trim150_scaffold_29288 Species: Flavobacterium beibuense (100%)	2	1340 bp	44.48	5.15	99.18
scnpilot_solids1_trim150_scaffold_21016 Species: Flavobacterium beibuense (50%)	2	1699 bp	42.97	5.21	99.23
scnpilot_solids1_trim150_scaffold_17696 Species: Chryseobacterium formosense (50%)	2	1918 bp	36.86	5.63	97.29
scnpilot_solids1_trim150_scaffold_32658 Species: Chryseobacterium jeonii (50%)	2	1238 bp	38.85	3.39	100.81
scnpilot_solids1_trim150_scaffold_9779 Species: BJP_IG2102_Flavobacteriales_34_12 (50%)	2	2935 bp	36.05	5.47	98.13
scnpilot_solids1_trim150_scaffold_35588 Species: R_Fluviicola_43_260 (50%)	2	1163 bp	37.92	2.45	92.35
scnpilot_solids1_trim150_scaffold_40797 Species: Riemerella anatipestifer (50%)	2	1052 bp	38.88	2.57	76.71
scnpilot_solids1_trim150_scaffold_33461 Species: Elizabethkingia miricola (100%)	2	1217 bp	40.18	3.94	98.36
scnpilot_solids1_trim150_scaffold_24031 Species: R_Fluviicola_43_260 (50%)	2	1545 bp	39.68	2.91	95.73
scnpilot_solids1_trim150_scaffold_25743 Species: Epilithonimonas lactis (50%)	2	1472 bp	38.25	4.08	89.67
scnpilot_solids1_trim150_scaffold_18655 Species: Chryseobacterium solincola (50%)	2	1846 bp	36.89	3.41	98.16
scnpilot_solids1_trim150_scaffold_27872 Species: R_Fluviicola_43_260 (50%)	2	1388 bp	38.83	3.24	99.86
scnpilot_solids1_trim150_scaffold_23456 Species: Elizabethkingia miricola (50%)	2	1574 bp	40.09	3.81	55.65
scnpilot_solids1_trim150_scaffold_11832 Species: Flavobacterium sp. F52 (50%)	2	2560 bp	38.09	3.75	87.54

Displaying items 501-550 of 814 in total

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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