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scnpilot_solids1_trim150_scaffold_471_25

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 30274..33288

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 999.99
  • Bit_score: 1053
  • Evalue 0.0
Ribonuclease E n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 999.99
  • Bit_score: 1057
  • Evalue 0.0
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 999.99
  • Bit_score: 1053
  • Evalue 0.0

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3015
ATGAAACGCATGTTGATCAACGCGACTCAGCGTGAGGAGTTGCGTGTGGCCATCGTCGATGGCCAGGCCCTGTACGACCTCGACCTCGAAATCCCCTCGCGCGAACAAAAGAAGTCGAACATCTACAAGGCCCGCATCACCCGGGTCGAACCTTCCCTCGAAGCCTGCTTCGTCGATTACGGCGCCGAACGCCACGGCTTCCTGCCACTGAAGGAAATCGCCCGCGAATACTTCGCGCAGGGGGTCGACCACAACAAGGCCGGCATCCGCGAACTGCTGAAGGAAGGCCAGCAGCTGATCGTGCAGGTCGAGAAGGAGGAACGCGGCAACAAGGGCGCCGCGCTCACCACTTATATCTCGCTGGCCGGCCGTTACATGGTGCTGATGCCCAACAGCCCGAACGCGGGCGGTGTCTCGCGCCGCATCGAGGGCGAGGACCGGCAGGCCCTGAAGGAAGCCCTGCAACACATTTCGGTGCCCGAGGAAATGGGCCTGATCGTGCGTACCGCCGGCGTCGGCCGCGACGCCGAGGAACTGCAGTGGGACCTCGACTACCTGCTGACCCTGTGGAAGGCCATCTCGGAAGCCGCCGCGGCGCGCTCCGCGCCGTTCCTGATCTACCAGGAATCCAAACTGTTCATCCGCGCGCTGCGCGACTATTTGCGCGCCGACATCGGCGAAATCCTGATCGACGAACCCGCGTTGTACGAAGACGCGAAACAGTTCATGCAGCAGGTGATGCCGAACAGCCTGCGCAAACTCAAGCTCTACAGCGACGACGTACCGCTGTTCACGCGCTTCCAGATCGAAACCCAGATCGAGAGTGCCTACGACCGCAACGTGCGGCTGCCGTCCGGCGGCTCGATCGTGATCGACCCGACCGAGGCGTTGACTTCCATCGACATCAACTCCTCGCGCGCCACCAAGGGCAGCGACATCGAAGACACCGCGTTCCGCACCAATTGCGAAGCCGCGGTCGAAGTCGCGCGCCAGTTGCGCATCCGCGACCTCGGCGGTCTGGTGGTGATCGACTTCATCGACATGGAAAGCTCGCGCCACCAGCGCGAGGTCGAAGACAAACTGCGCGACGCGCTGAAACTCGACCGTGCACGCGTGCAGCTCGGCCGCATTTCGCGTTTCGGCCTGATGGAGCTTTCCCGCCAACGCTTGCGCCCGAGCCTCGATGAATCCACCCAGATCGTGTGCCCGCGCTGCGAAGGCCACGGCCGCATCCGCGGCATCGAGTCGCTGTCGCTCTCGGCGCTGCGCCTGATCGAAGAGCACGCGATGAAGGAAAACACCGGGCAGGTGCTGGTGCAGGCGCCAACCCGCGTGGCCAATTTCCTGCTCAACGAGAAGCGTTCCAGCGTGGTCGAAATCGAATTGCGCCACAAGGTGCACGTGGTGATCGTCGCCGACGAGAACCTGGAAACGCCGCACCTCGAAATCACCCGCATCCGCGAAAGCGAGATGGGCGAGCACGCCAAGCCGAGCTACGAGCGCCTGACCGAAGTCGCGGCCACGCCGCAACCGCGCATGGGCGTGGTGGTGCACGGCGAGGAACCCGCGGTCAGCGGCATCCAGCGCGCCACGCCGATGCCGCAGCGCGAGGAAGTCGAACCTGTTTCCGCGCCGATCGCTGCCGCTGCGCCGGCGGCGGCGTCGGGCGGCTTGCTCGGACGCCTGTTCGGCTGGTTCCGTGCCCCGCCTGCAGCCGAACCCACGCTCGCGGAACTGACACAGGCGCCACGCACGCCGCCACGCAGCGACAACACGGCCCGTCGCGAACGCACGTCCGAACGCCGTGGCGAGGCATCCAGCCACAACGGCGCGCGCCGCAACGGCCACGATCGTGATCGCGACGGCGATGCCCGCCGCGGGCGCCAGCAGGGCCAGCAGCCATCGAAAGGTTCACAGGCCAAACCGAACAAGTCGCGTGCGGAAGATTCGCAGCGCCAGCCGCGCCAGGGCCAGAAGCCGGCGGCATCCGCCGCAGTGAAACCCGCCGGCGAAACGCACGCCCAGGAAACCAGGCCTGCCCGCAGCGAACCGGCAACGCCGCGACATGAAACGCAGCGCCCGGCTGCAGCAACGCCCGTGTCTGCGCCCGCCGCCGACCCCATAGCCGCAAAACCCGCTGGCGTGCCCGCAGGCGCTGCTGAAACAAGCACCGCGCCGAACGCAGCGCCCGCCGATGATGCATCCGCCGGCACCGGCAAGCGCCGTCGTGGACGCCGTGGTGGACGCCGCCGCAAGCACGCCAACGCGACCGCGCAGAATGGCAACGCACCCGGCGCACCACGCGATATCGACGACGAAGACGCCGATCGCAGCCATGCGGCTTCCGTTGCGGCGCCGATTGCGCCGCCCGTGAACCGCGCACCGGAACCGTCGCGCGCAGCGGAAACATCTCCCGCGACGACGGCTCCGGCGGCGCCTTCCGGCGCGCCGTCGCGGGAGAGCGCGCCCACCACCGCGCCGCTGTTCACGACGCCCGAACACAAGCCGGACACATCGGGGCCGGTCGCCCCGCCGTTGCAACCGGCCGCTGTGGCAAATCCGCAGCCAACCGCCGCGACGCGTGCTCCGATGCCTGTGCACACTCCCGAACAACCGGGTACATCCGCCGCGCCGCCCGCCACGCCTGCGCCGATGCCCTCGACGCCGGTGCTACCATCGGCTGCCGTGCGCGCACCGCAACCCGCACCTGCGCCGCAACCGGCAATCACGACGCCACCCGTAGCGCCTGCCGTGGCCGCCCCGGTCGGCCCGACCGTGTCGGCCGCGCCGAAAACCGAACCCGTGACGCCATCGCTGTTCGCGGCGCCACCTTCCGCGCGGCCCACCGTGCAACCGCTGCCGCGGCATCCGGCCATCCCGACGCAACGCCCGTTGTCCGGGGCGATACGGCCGATCCTGGCGCCGAGCGTGCCGACGACCAAGACCCCGCCAGCCAACCCCGCGCCGCCTGCCGAAGCCCAGCCGCCGTCATCCGACAAGGGCGCGGCGGAGTAG
PROTEIN sequence
Length: 1005
MKRMLINATQREELRVAIVDGQALYDLDLEIPSREQKKSNIYKARITRVEPSLEACFVDYGAERHGFLPLKEIAREYFAQGVDHNKAGIRELLKEGQQLIVQVEKEERGNKGAALTTYISLAGRYMVLMPNSPNAGGVSRRIEGEDRQALKEALQHISVPEEMGLIVRTAGVGRDAEELQWDLDYLLTLWKAISEAAAARSAPFLIYQESKLFIRALRDYLRADIGEILIDEPALYEDAKQFMQQVMPNSLRKLKLYSDDVPLFTRFQIETQIESAYDRNVRLPSGGSIVIDPTEALTSIDINSSRATKGSDIEDTAFRTNCEAAVEVARQLRIRDLGGLVVIDFIDMESSRHQREVEDKLRDALKLDRARVQLGRISRFGLMELSRQRLRPSLDESTQIVCPRCEGHGRIRGIESLSLSALRLIEEHAMKENTGQVLVQAPTRVANFLLNEKRSSVVEIELRHKVHVVIVADENLETPHLEITRIRESEMGEHAKPSYERLTEVAATPQPRMGVVVHGEEPAVSGIQRATPMPQREEVEPVSAPIAAAAPAAASGGLLGRLFGWFRAPPAAEPTLAELTQAPRTPPRSDNTARRERTSERRGEASSHNGARRNGHDRDRDGDARRGRQQGQQPSKGSQAKPNKSRAEDSQRQPRQGQKPAASAAVKPAGETHAQETRPARSEPATPRHETQRPAAATPVSAPAADPIAAKPAGVPAGAAETSTAPNAAPADDASAGTGKRRRGRRGGRRRKHANATAQNGNAPGAPRDIDDEDADRSHAASVAAPIAPPVNRAPEPSRAAETSPATTAPAAPSGAPSRESAPTTAPLFTTPEHKPDTSGPVAPPLQPAAVANPQPTAATRAPMPVHTPEQPGTSAAPPATPAPMPSTPVLPSAAVRAPQPAPAPQPAITTPPVAPAVAAPVGPTVSAAPKTEPVTPSLFAAPPSARPTVQPLPRHPAIPTQRPLSGAIRPILAPSVPTTKTPPANPAPPAEAQPPSSDKGAAE*