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scnpilot_solids2_trim150_scaffold_4413

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4413_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..912)
DNA (912bp) protein (304aa)
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WSJ3_9GAMM
Isocitrate lyase {ECO:0000313|EMBL:EIM02435.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_4413_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1055..2647)
DNA (1593bp) protein (531aa)
Malate synthase {ECO:0000313|EMBL:EIL98083.1}; EC=2.3.3.9 {ECO:0000313|EMBL:EIL98083.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF42_9GAMM
scnpilot_solids2_trim150_scaffold_4413_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2771..3811
DNA (1041bp) protein (347aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W786_9GAMM
transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4413_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3855..4451)
DNA (597bp) protein (199aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKP4_9GAMM
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AGG90657.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4413_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4448..4870)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF38_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98079.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein chain release factor B
scnpilot_solids2_trim150_scaffold_4413_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4981..5607)
DNA (627bp) protein (209aa)
23S RNA-specific pseudouridylate synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJX6_9GAMM
23S RNA-specific pseudouridylate synthase {ECO:0000313|EMBL:EIL95324.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_4413_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5709..6422)
DNA (714bp) protein (238aa)
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
2-octaprenylphenol hydroxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIC8_9GAMM
scnpilot_solids2_trim150_scaffold_4413_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7303..7953)
DNA (651bp) protein (217aa)
Sterol-binding domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJX8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90653.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4413_9
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8093..8563)
DNA (471bp) protein (157aa)
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKP0_9GAMM
putative rRNA methylase SpoU family
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids2_trim150_scaffold_4413_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8589..8798)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NT33_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90651.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4413_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9071..11287
DNA (2217bp) protein (739aa)
Putative Zn-dependent peptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NI73_9GAMM
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AGG90650.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
putative Zn-dependent peptidase
Displaying 11 items

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