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scnpilot_solids2_trim150_scaffold_1168

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1168_1
unknown

Not on your lists

comp(91..360)
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1168_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

579..1403
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92288.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aminopeptidase N
scnpilot_solids2_trim150_scaffold_1168_3
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1551..3164)
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F26BA0 rbh
Contig45, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77100.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
glycogen debranching protein
scnpilot_solids2_trim150_scaffold_1168_4
unknown

Not on your lists

comp(3167..3475)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F26BA0
scnpilot_solids2_trim150_scaffold_1168_5
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3585..4883)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DB519F
Uncharacterized protein {ECO:0000313|EMBL:AIF48467.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
outer membrane receptor protein
scnpilot_solids2_trim150_scaffold_1168_6
unknown

Not on your lists

5493..6770
DNA (1278bp) protein (426aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1168_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6950..7561)
DNA (612bp) protein (204aa)
Peroxiredoxin n=2 Tax=Rhodanobacter denitrificans RepID=M4NB53_9GAMM
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGG87845.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7668..8696)
DNA (1029bp) protein (343aa)
Serine kinase of the HPr protein, regulates carbohydrate metabolism n=3 Tax=Rhodanobacter denitrificans RepID=M4NB84_9GAMM
serine kinase of the HPr protein, regulates carbohydrate metabolism
Serine kinase of the HPr protein, regulates carbohydrate metabolism {ECO:0000313|EMBL:AGG87844.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8927..10441
DNA (1515bp) protein (505aa)
Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEA6_9GAMM
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:AGG87843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10416..11633
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WCQ7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87842.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11664..12602
DNA (939bp) protein (313aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WCQ8_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12564..13703)
DNA (1140bp) protein (380aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB50_9GAMM
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13700..14770)
DNA (1071bp) protein (357aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT51_9GAMM
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87839.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_14
unknown

Not on your lists

15139..15297
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1168_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16291..16992)
DNA (702bp) protein (234aa)
Biotin synthesis protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT53_9GAMM rbh
methylase involved in ubiquinone/menaquinone biosynthesis rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87837.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16995..18215)
DNA (1221bp) protein (407aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ54_9GAMM
cytosine deaminase-like metal-dependent hydrolase
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:AGG87836.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18220..19104)
DNA (885bp) protein (295aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NB46_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87835.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19249..20067)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT56_9GAMM
uncharacterized protein involved in exopolysaccharide biosynthesis
Uncharacterized protein involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:AGG87834.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20078..21238)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT57_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87833.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21235..22164)
DNA (930bp) protein (310aa)
Glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND95_9GAMM
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGG87832.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22161..23414)
DNA (1254bp) protein (418aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ50_9GAMM
membrane protein involved in the export of O-antigen and teichoic acid
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AGG87831.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23411..24568)
DNA (1158bp) protein (386aa)
Aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT60_9GAMM
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:AGG87830.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24568..25542)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NB73_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87829.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25487..26440)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE94_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87828.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26447..27112)
DNA (666bp) protein (222aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Rhodanobacter denitrificans RepID=I4WT63_9GAMM
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:AGG87827.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27097..27534)
DNA (438bp) protein (146aa)
NDP-hexose isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT64_9GAMM
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme {ECO:0000313|EMBL:AGG87826.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27761..29119
DNA (1359bp) protein (453aa)
Cytochrome C n=1 Tax=Rhodanobacter denitrificans RepID=I4WT65_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87825.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29400..30212
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT66_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87824.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30289..30873
DNA (585bp) protein (195aa)
RNA polymerase sigma-E factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WT67_9GAMM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG87823.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1168_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30870..31505
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4ND87_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87822.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 36 in total

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