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scnpilot_solids2_trim150_scaffold_1312

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1312_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1755)
DNA (1755bp) protein (585aa)
Malic enzyme {ECO:0000313|EMBL:AHX14823.1}; EC=1.1.1.40 {ECO:0000313|EMBL:AHX14823.1};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
malic enzyme n=1 Tax=Dyella japonica RepID=UPI00031B3A3C
malic enzyme
scnpilot_solids2_trim150_scaffold_1312_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1826..3097)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLM1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90548.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1312_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3167..4222)
DNA (1056bp) protein (352aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1R3_9GAMM
ribosome small subunit-dependent GTPase A
scnpilot_solids2_trim150_scaffold_1312_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4280..5632
DNA (1353bp) protein (451aa)
Aminotransferase AlaT {ECO:0000313|EMBL:EIL97706.1}; EC=2.6.1.2 {ECO:0000313|EMBL:EIL97706.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Aminotransferase AlaT n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE15_9GAMM
aspartate/tyrosine/aromatic aminotransferase
scnpilot_solids2_trim150_scaffold_1312_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5642..6265
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWA3_9GAMM
lysophospholipase L1-like esterase
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:AGG90551.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1312_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6328..6936
DNA (609bp) protein (203aa)
Glutaredoxin-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR52_9GAMM
Glutaredoxin-like protein {ECO:0000313|EMBL:EIL89693.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
monothiol glutaredoxin, Grx4 family
scnpilot_solids2_trim150_scaffold_1312_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6991..8310)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037F214E
Aspartyl beta-hydroxylase {ECO:0000313|EMBL:AHX14708.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
aspartyl/asparaginyl beta-hydroxylase-like dioxygenase
scnpilot_solids2_trim150_scaffold_1312_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8460..10043
DNA (1584bp) protein (528aa)
Sulfotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE20_9GAMM
Sulfotransferase {ECO:0000313|EMBL:EIL97711.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tetratricopeptide repeat protein,sulfotransferase family protein
scnpilot_solids2_trim150_scaffold_1312_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10050..11687
DNA (1638bp) protein (546aa)
Sulfotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE21_9GAMM rbh
Sulfotransferase {ECO:0000313|EMBL:EIL97712.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sulfotransferase family protein rbh
scnpilot_solids2_trim150_scaffold_1312_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11819..13636)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWA9_9GAMM
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG90557.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1312_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13715..16654)
DNA (2940bp) protein (980aa)
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB0_9GAMM rbh
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AGG90558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
outer membrane cobalamin receptor protein rbh
scnpilot_solids2_trim150_scaffold_1312_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16683..17957
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90594.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
EDD domain protein, DegV family
scnpilot_solids2_trim150_scaffold_1312_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17980..18657)
DNA (678bp) protein (226aa)
Tropinone reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ4_9GAMM
Tropinone reductase {ECO:0000313|EMBL:EIL90595.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_1312_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18767..18973
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90562.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1312_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18983..20848)
DNA (1866bp) protein (622aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Signal peptide peptidase SppA, 67K type n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB5_9GAMM
signal peptide peptidase SppA, 67K type
scnpilot_solids2_trim150_scaffold_1312_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20866..22122)
DNA (1257bp) protein (419aa)
Putative efflux protein, MATE family n=1 Tax=Rhodanobacter denitrificans RepID=M4NI45_9GAMM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:AGG90564.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1312_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22321..23514
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90599.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3667)
scnpilot_solids2_trim150_scaffold_1312_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23889..25778
DNA (1890bp) protein (630aa)
Primosome assembly protein PriA n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB8_9GAMM
replication restart DNA helicase PriA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1312_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25727..25903
DNA (177bp) protein (59aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Primosome assembly protein PriA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE31_9GAMM
replication restart DNA helicase PriA
scnpilot_solids2_trim150_scaffold_1312_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25908..26687)
DNA (780bp) protein (260aa)
Sec-independent protein translocase protein TatC n=1 Tax=Rhodanobacter denitrificans RepID=M4NKG7_9GAMM
twin arginine targeting protein translocase subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1312_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26674..27114)
DNA (441bp) protein (147aa)
Sec-independent protein translocase protein TatB n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL15_9GAMM
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
twin arginine-targeting protein translocase TatB
scnpilot_solids2_trim150_scaffold_1312_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27142..27381)
DNA (240bp) protein (80aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR2_9GAMM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
twin arginine-targeting protein translocase, TatA/E family
scnpilot_solids2_trim150_scaffold_1312_23
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27441..28130)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1312_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28239..29294
DNA (1056bp) protein (352aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ferrochelatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX65_9GAMM
scnpilot_solids2_trim150_scaffold_1312_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29291..30145
DNA (855bp) protein (285aa)
Alpha/beta hydrolase fold domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX66_9GAMM
putative hydrolase or acyltransferase of alpha/beta superfamily
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AGG90572.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1312_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30234..30656)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTD6_9GAMM
Peptidase family M49
Peptidase family M49 {ECO:0000313|EMBL:AGG90573.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 26 items

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