ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Properties

Avg. coverage: 1.00 Longest contig: 8.95 Kbp Bin length: 1.31 Mbp GC content: 39.03 %

Contigs count: 814 Features count: 1669 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38

Displaying items 151-200 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_32197_curated Species: Flavobacterium sp. MEB061 (100%)	1	1237 bp	38.08	1.00	99.68
scnpilot_solids1_trim150_scaffold_33008_curated Species: R_Fluviicola_43_260 (100%)	1	1225 bp	38.61	1.00	99.67
scnpilot_solids1_trim150_scaffold_18688_curated Species: R_Fluviicola_43_260 (50%)	2	1791 bp	41.54	1.00	99.67
scnpilot_solids1_trim150_scaffold_27340_curated Species: Flavobacteriales bacterium BRH_c54 (50%)	2	1406 bp	41.89	1.00	99.64
scnpilot_solids1_trim150_scaffold_25875_curated Species: Fluviicola taffensis (50%)	2	1400 bp	40.79	1.00	99.64
scnpilot_solids1_trim150_scaffold_37596_curated Species: Fluviicola taffensis (50%)	2	1114 bp	42.37	1.00	99.64
scnpilot_solids1_trim150_scaffold_38186_curated Species: Chryseobacterium gleum (100%)	1	1102 bp	45.74	1.00	99.64
scnpilot_solids1_trim150_scaffold_32936_curated Species: Chryseobacterium gleum (100%)	1	1099 bp	35.21	1.00	99.64
scnpilot_solids1_trim150_scaffold_43614_curated Species: Epilithonimonas lactis (100%)	1	822 bp	35.40	1.00	99.63
scnpilot_solids1_trim150_scaffold_38803_curated Species: Joostella marina (50%)	2	1090 bp	37.34	1.00	99.63
scnpilot_solids1_trim150_scaffold_33772_curated Species: Flavobacterium sp. CF136 (100%)	1	1087 bp	46.92	1.00	99.63
scnpilot_solids1_trim150_scaffold_39463_curated Species: Flavobacterium cauense (100%)	1	1075 bp	41.21	1.00	99.63
scnpilot_solids1_trim150_scaffold_39619_curated Species: R_Fluviicola_43_260 (100%)	1	1072 bp	43.28	1.00	99.63
scnpilot_solids1_trim150_scaffold_36476_curated Species: Elizabethkingia miricola (100%)	1	1066 bp	41.28	1.00	99.62
scnpilot_solids1_trim150_scaffold_42315_curated Species: Fluviicola taffensis (100%)	1	1021 bp	43.88	1.00	99.61
scnpilot_solids1_trim150_scaffold_16781_curated Species: R_Fluviicola_43_260 (50%)	2	1997 bp	36.91	1.00	99.60
scnpilot_solids1_trim150_scaffold_33663_curated Species: Chryseobacterium piperi (50%)	2	1208 bp	30.46	1.00	99.59
scnpilot_solids1_trim150_scaffold_27811_curated Species: Chryseobacterium luteum (100%)	1	705 bp	47.09	1.00	99.57
scnpilot_solids1_trim150_scaffold_9471_curated Species: Fluviicola taffensis (100%)	2	2998 bp	44.20	1.00	99.57
scnpilot_solids1_trim150_scaffold_37858_curated Species: R_Fluviicola_43_260 (100%)	2	1109 bp	38.95	1.00	99.55
scnpilot_solids1_trim150_scaffold_33065_curated Species: Flavobacterium hydatis (50%)	2	1224 bp	52.70	1.00	99.51
scnpilot_solids1_trim150_scaffold_41759_curated Species: Chryseobacterium sp. P1-3 (100%)	1	769 bp	34.20	1.00	99.48
scnpilot_solids1_trim150_scaffold_29331_curated Species: R_Fluviicola_43_260 (50%)	2	1336 bp	45.13	1.00	99.48
scnpilot_solids1_trim150_scaffold_38527_curated Order: Flavobacteriales (66.67%)	3	1095 bp	39.18	1.00	99.45
scnpilot_solids1_trim150_scaffold_25877_curated Species: Chryseobacterium formosense (50%)	2	1442 bp	32.11	1.00	99.45
scnpilot_solids1_trim150_scaffold_27015_curated Order: Flavobacteriales (66.67%)	3	1418 bp	44.43	1.00	99.44
scnpilot_solids1_trim150_scaffold_23839_curated Species: Fluviicola taffensis (100%)	2	1551 bp	44.04	1.00	99.42
scnpilot_solids1_trim150_scaffold_29529_curated Species: R_Fluviicola_43_260 (50%)	2	1174 bp	43.53	1.00	99.40
scnpilot_solids1_trim150_scaffold_37608_curated Species: Flavobacteriaceae bacterium 3519-10 (50%)	2	1114 bp	42.19	1.00	99.37
scnpilot_solids1_trim150_scaffold_38927_curated Species: Gramella forsetii (66.67%)	3	1087 bp	30.91	1.00	99.36
scnpilot_solids1_trim150_scaffold_39059_curated Species: Joostella marina (100%)	2	1084 bp	35.79	1.00	99.35
scnpilot_solids1_trim150_scaffold_13442_curated Species: Elizabethkingia anophelis (50%)	2	2271 bp	36.24	1.00	99.34
scnpilot_solids1_trim150_scaffold_36262_curated Species: Fluviicola taffensis (100%)	2	1145 bp	44.54	1.00	99.30
scnpilot_solids1_trim150_scaffold_31369_curated Species: Elizabethkingia miricola (100%)	2	1272 bp	36.56	1.00	99.29
scnpilot_solids1_trim150_scaffold_27264_curated Species: RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated (50%)	2	1408 bp	35.37	1.00	99.29
scnpilot_solids1_trim150_scaffold_33889_curated Species: Chryseobacterium luteum (50%)	2	1203 bp	35.49	1.00	99.25
scnpilot_solids1_trim150_scaffold_34235_curated Species: Flavobacterium hydatis (50%)	2	1046 bp	45.79	1.00	99.24
scnpilot_solids1_trim150_scaffold_19856_curated Order: Flavobacteriales (66.67%)	3	1699 bp	36.37	1.00	99.23
scnpilot_solids1_trim150_scaffold_21016_curated Species: Flavobacterium beibuense (50%)	2	1696 bp	43.04	1.00	99.23
scnpilot_solids1_trim150_scaffold_23848_curated Species: Flavobacterium frigoris (50%)	2	1551 bp	36.94	1.00	99.23
scnpilot_solids1_trim150_scaffold_14694_curated Species: Imtechella halotolerans (50%)	2	2192 bp	44.25	1.00	99.22
scnpilot_solids1_trim150_scaffold_37941_curated Species: Elizabethkingia sp. BM10 (50%)	2	1107 bp	32.70	1.00	99.19
scnpilot_solids1_trim150_scaffold_27077_curated Species: Flavobacterium sp. MEB061 (50%)	2	1416 bp	49.08	1.00	99.15
scnpilot_solids1_trim150_scaffold_24318_curated Species: Elizabethkingia meningoseptica (50%)	2	1528 bp	43.65	1.00	99.15
scnpilot_solids1_trim150_scaffold_40926_curated Species: Flavobacterium sp. 316 (50%)	2	1047 bp	35.63	1.00	99.14
scnpilot_solids1_trim150_scaffold_24031_curated Species: R_Fluviicola_43_260 (50%)	2	1386 bp	40.19	1.00	99.13
scnpilot_solids1_trim150_scaffold_15272_curated Species: Bergeyella zoohelcum (50%)	2	2128 bp	41.31	1.00	99.11
scnpilot_solids1_trim150_scaffold_39479_curated Species: Fluviicola taffensis (100%)	2	1075 bp	35.44	1.00	99.07
scnpilot_solids1_trim150_scaffold_31257_curated Species: Chryseobacterium formosense (50%)	2	1181 bp	32.01	1.00	99.07
scnpilot_solids1_trim150_scaffold_25676_curated Species: Elizabethkingia miricola (100%)	2	1472 bp	38.52	1.00	99.05

Displaying items 151-200 of 814 in total

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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