ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Properties

Avg. coverage: 1.00 Longest contig: 8.95 Kbp Bin length: 1.31 Mbp GC content: 39.03 %

Contigs count: 814 Features count: 1669 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38

Displaying items 1-50 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_37704_curated Species: R_Fluviicola_43_260 (50%)	2	1112 bp	37.32	1.00	107.64
scnpilot_solids1_trim150_scaffold_38773_curated Species: R_Fluviicola_43_260 (66.67%)	3	1101 bp	37.51	1.00	105.72
scnpilot_solids1_trim150_scaffold_28614_curated Species: Weeksella virosa (50%)	2	1359 bp	45.62	1.00	103.75
scnpilot_solids1_trim150_scaffold_43516_curated Species: R_Fluviicola_43_260 (50%)	2	996 bp	40.06	1.00	103.01
scnpilot_solids1_trim150_scaffold_13911_curated Genus: Flavobacterium (50%)	4	2270 bp	43.00	1.00	102.55
scnpilot_solids1_trim150_scaffold_42060_curated	3	771 bp	42.28	1.00	102.34
scnpilot_solids1_trim150_scaffold_13630_curated Genus: Flavobacterium (66.67%)	3	2143 bp	43.21	1.00	101.77
scnpilot_solids1_trim150_scaffold_22013_curated Species: Chryseobacterium sp. JM1 (50%)	2	1524 bp	44.75	1.00	101.57
scnpilot_solids1_trim150_scaffold_29491_curated Genus: Chryseobacterium (66.67%)	3	1331 bp	43.95	1.00	101.43
scnpilot_solids1_trim150_scaffold_33501_curated Species: Fluviicola taffensis (50%)	2	1213 bp	44.77	1.00	101.15
scnpilot_solids1_trim150_scaffold_14690_curated Species: Fluviicola taffensis (50%)	4	2188 bp	43.01	1.00	101.05
scnpilot_solids1_trim150_scaffold_30634_curated Species: Chryseobacterium sp. P1-3 (50%)	2	1064 bp	34.96	1.00	100.94
scnpilot_solids1_trim150_scaffold_34568_curated Species: Chryseobacterium soli (50%)	2	1186 bp	40.47	1.00	100.93
scnpilot_solids1_trim150_scaffold_42004_curated Species: Chryseobacterium solincola (100%)	2	958 bp	43.11	1.00	100.84
scnpilot_solids1_trim150_scaffold_32658_curated Species: Chryseobacterium jeonii (50%)	2	1235 bp	38.95	1.00	100.81
scnpilot_solids1_trim150_scaffold_36501_curated Species: Elizabethkingia sp. BM10 (50%)	2	1078 bp	39.52	1.00	100.74
scnpilot_solids1_trim150_scaffold_35397_curated Species: Fluviicola taffensis (50%)	2	1117 bp	37.60	1.00	100.72
scnpilot_solids1_trim150_scaffold_39895_curated Species: Flavobacterium sp. AED (100%)	2	1001 bp	38.76	1.00	100.70
scnpilot_solids1_trim150_scaffold_10717_curated Species: Nonlabens dokdonensis (50%)	2	2741 bp	34.80	1.00	100.69
scnpilot_solids1_trim150_scaffold_25590_curated Species: Nonlabens dokdonensis (50%)	2	1389 bp	33.55	1.00	100.65
scnpilot_solids1_trim150_scaffold_37599_curated Species: Nonlabens ulvanivorans (50%)	2	914 bp	38.95	1.00	100.44
scnpilot_solids1_trim150_scaffold_42698_curated Species: Chryseobacterium sp. JM1 (100%)	2	996 bp	42.67	1.00	100.30
scnpilot_solids1_trim150_scaffold_34228_curated Species: Flavobacterium sp. CF136 (50%)	2	1194 bp	44.97	1.00	100.25
scnpilot_solids1_trim150_scaffold_39885_curated Species: Flavobacteriaceae bacterium 3519-10 (50%)	2	1066 bp	36.59	1.00	100.19
scnpilot_solids1_trim150_scaffold_36267_curated Genus: Chryseobacterium (66.67%)	3	1144 bp	35.23	1.00	100.18
scnpilot_solids1_trim150_scaffold_20596_curated Species: Fluviicola taffensis (50%)	2	1722 bp	37.98	1.00	100.17
scnpilot_solids1_trim150_scaffold_20789_curated Species: Flavobacterium branchiophilum (50%)	2	1711 bp	34.02	1.00	100.12
scnpilot_solids1_trim150_scaffold_29179_curated Species: Elizabethkingia meningoseptica (50%)	2	1031 bp	45.20	1.00	100.10
scnpilot_solids1_trim150_scaffold_36667_curated Species: Fluviicola taffensis (100%)	2	1136 bp	40.67	1.00	100.09
scnpilot_solids1_trim150_scaffold_30685_curated Species: Imtechella halotolerans (50%)	2	1271 bp	34.85	1.00	100.08
scnpilot_solids1_trim150_scaffold_21651_curated Species: Ancylostoma ceylanicum (50%)	2	1613 bp	39.00	1.00	100.06
scnpilot_solids1_trim150_scaffold_19983_curated Species: Myroides profundi (50%)	2	1760 bp	40.63	1.00	100.06
scnpilot_solids1_trim150_scaffold_9837_curated Species: Chryseobacterium sp. P1-3 (100%)	1	2913 bp	35.94	1.00	100.00
scnpilot_solids1_trim150_scaffold_42318_curated Species: Fluviicola taffensis (100%)	1	996 bp	46.59	1.00	100.00
scnpilot_solids1_trim150_scaffold_40995_curated Species: R_Fluviicola_43_260 (100%)	1	939 bp	39.94	1.00	100.00
scnpilot_solids1_trim150_scaffold_30671_curated Species: Kordia algicida (100%)	1	1230 bp	42.93	1.00	100.00
scnpilot_solids1_trim150_scaffold_40657_curated Species: Fluviicola taffensis (100%)	1	975 bp	43.59	1.00	100.00
scnpilot_solids1_trim150_scaffold_42166_curated Species: Fluviicola taffensis (100%)	1	1023 bp	45.45	1.00	100.00
scnpilot_solids1_trim150_scaffold_23627_curated Species: Capnocytophaga sp. oral taxon 329 (100%)	1	1227 bp	35.62	1.00	100.00
scnpilot_solids1_trim150_scaffold_34593_curated Species: Algibacter lectus (100%)	1	1185 bp	36.54	1.00	100.00
scnpilot_solids1_trim150_scaffold_43283_curated Species: Francisella philomiragia (100%)	1	831 bp	38.99	1.00	100.00
scnpilot_solids1_trim150_scaffold_30033_curated Species: Aequorivita sublithincola (100%)	1	1149 bp	44.65	1.00	100.00
scnpilot_solids1_trim150_scaffold_19469_curated Species: Weeksella virosa (100%)	1	1791 bp	36.74	1.00	100.00
scnpilot_solids1_trim150_scaffold_36887_curated Species: R_Fluviicola_43_260 (100%)	1	1131 bp	37.93	1.00	100.00
scnpilot_solids1_trim150_scaffold_25798_curated Species: Chryseobacterium taiwanense (100%)	1	1365 bp	38.90	1.00	100.00
scnpilot_solids1_trim150_scaffold_32749_curated Species: Leeuwenhoekiella blandensis (50%)	2	1191 bp	39.04	1.00	100.00
scnpilot_solids1_trim150_scaffold_38618_curated Species: Bergeyella zoohelcum (100%)	1	969 bp	33.44	1.00	100.00
scnpilot_solids1_trim150_scaffold_27289_curated Species: Formosa agariphila (100%)	1	1407 bp	36.82	1.00	100.00
scnpilot_solids1_trim150_scaffold_40905_curated Species: R_Fluviicola_43_260 (100%)	1	1047 bp	39.83	1.00	100.00
scnpilot_solids1_trim150_scaffold_36195_curated Species: GWF1_Flavobacteria_32_7_curated (100%)	1	1146 bp	41.62	1.00	100.00

Displaying items 1-50 of 814 in total

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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