ggKbase home page

scnpilot_solids1_trim150_scaffold_917_curated_16

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(17270..18685)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 470.0
  • Bit_score: 809
  • Evalue 2.00e-231
3-isopropylmalate dehydratase large subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQU3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 470.0
  • Bit_score: 809
  • Evalue 1.40e-231
3-isopropylmalate dehydratase, large subunit similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 470.0
  • Bit_score: 782
  • Evalue 5.80e-224

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGAACCCGCGCACCCTGTTCGAAAAAGTCTGGGACGCGCACCTGGTGGCGGCGGAAACCCCGGCCACGCCGGCAGTCCTGTACATCGACCTGCACCTGCTGCACGAAGTGACCTCGCCGCAGGCATTCGACGTGCTGCGCGAACGCGGCCTGCGCCTGCGTCGGCCGGACCGCACCCTGGCCACGCTGGACCACTCCACCCCGACCCTGCCGCGCGGCGCCGACGGCCAACGCCCCTACGCCACGCCGGCGGCGCAGGCCCAGGTGGAGCAGTTGGAAGCGAACTGCCGCGAATTCGGCGTGACCCTGCATGGCTGGGACAGCCCGCATCGCGGCATCGTGCACGTGATCGGCCCCGAGCTGGGCGCGACCCGGCCCGGCATGACCATCGTCTGCGGCGACAGCCACACCTCCACCCACGGCGCGTTTGGCGCCCTCGCGTTCGGCATCGGCACCACCGAGGTCGGCCACGTGCTCGCCAGCCAATGCCTGCTGCAGCGCAAGCCGAAGACCCTGGCCATCCACGTCGACGGCACCCTGCCGCCGGGGGTCGGCGCCAAGGACCTGATCCTGCACATCATTGGCGCGATTGGCGTGGACGGCGGCACCGGCCACGTCATCGAATACCGCGGCTCGACCATCGAGGCGCTGTCGATGGAGCAGCGCATGACCGTATGCAACATGTCGATCGAAGCCGGCGCCCGCGCCGGCATGATCGCCCCGGACGACACCACGTTTGCCTGGCTGCAAGGTCGCCCGCACGCGCCGCAAGGCAGCGACTGGGATGCCGCGGTAATGCGCTGGCGGGCATTGCGCAGCGATCCCGGCGCAAGTTATGACCGCGAACTGCATTTCGACGCCAGCCAGGTCCAGCCCACGGTGACCTATGGCACGCATCCAGGCATGGCGCTGGCCTTGGGTGACAAGCTGCCCGCGCCACGCAACGCCCAGGAGCAGCGTGCCGCCAGCTACATGCGCTACCACCCGGGGCAGTCGATGCTGGGCACGGCCGTGGACGTGGTGTTCATCGGGAGCTGCACCAATGCGCGCCTGCCCGACCTGCGCGAGGCGGCACGCATCCTGCGCGGCCGGCACGTGGCCGACGGCGTGCGCATGCTCGTGGTGCCGGGCTCGGAAACCGTGCGCCGCGATGCCGAGGCCGAAGGCCTGCACCAGGTGTTCCTCGCCGCCGGCGCCGAATGGCGCCAGCCCGGCTGCTCGATGTGCATCGCCATGAACGGCGACCTGGCCCAGCCCGGCCAGCTCGTCGTGTCCACCTCCAACCGCAACTTCGAAGGCCGCCAGGGCAAGGGCGCGCGCACCGTGCTGGCCAGCCCCGCTACCGCCGCCGCCTGTGCGGTGGCCGGAGCGATTGCCGATCCACGCACCTATCTCGCAGCCGAGGCCAGCGCATGA
PROTEIN sequence
Length: 472
MNPRTLFEKVWDAHLVAAETPATPAVLYIDLHLLHEVTSPQAFDVLRERGLRLRRPDRTLATLDHSTPTLPRGADGQRPYATPAAQAQVEQLEANCREFGVTLHGWDSPHRGIVHVIGPELGATRPGMTIVCGDSHTSTHGAFGALAFGIGTTEVGHVLASQCLLQRKPKTLAIHVDGTLPPGVGAKDLILHIIGAIGVDGGTGHVIEYRGSTIEALSMEQRMTVCNMSIEAGARAGMIAPDDTTFAWLQGRPHAPQGSDWDAAVMRWRALRSDPGASYDRELHFDASQVQPTVTYGTHPGMALALGDKLPAPRNAQEQRAASYMRYHPGQSMLGTAVDVVFIGSCTNARLPDLREAARILRGRHVADGVRMLVVPGSETVRRDAEAEGLHQVFLAAGAEWRQPGCSMCIAMNGDLAQPGQLVVSTSNRNFEGRQGKGARTVLASPATAAACAVAGAIADPRTYLAAEASA*