ggKbase home page

scnpilot_solids1_trim150_scaffold_779_curated_14

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 11959..13155

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037811F6 similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 390.0
  • Bit_score: 324
  • Evalue 2.00e-85
Putative anti-sigma factor {ECO:0000313|EMBL:EDM34881.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 400.0
  • Bit_score: 316
  • Evalue 5.80e-83
FecR protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 371.0
  • Bit_score: 310
  • Evalue 7.20e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1197
ATGCAACAGACAGAACTTAAGACATTTTTTGAAAAATTTGACCTTGGTACCAACACGGAAGAGGAACATCAGCAATTTATCGAATGGCTGAAAACTGCTCCTATTGAAGATGTCAAAGCCATCCTGGAAGAATACCATATTAATGTGAATAGAGATCGTTCGCCTAACGATGAAGTTGATTTGAATCTTGTATCGCAGATTGAAGCCGCTTTAGATCAATACGAGTTAGGTAAAGAACTTAGGTATGTGAACGATAAAAAGATCTCATGGCGTTTTTTCTCCAGGGTTGCTGCTGCTTTAGTAATTTTAATTTCGGGCATAGCTATCTATTTTGCTTTGAAAACTAATCGGCACAATACAATAGCTAAAGCACCTTCACTGCAATTGAAGAATGAAGTAGTACCCGGGGGTAATAAAGCCATACTCACTTTATCAGATGGGGCTACCATTATCTTAGATGATGCAAAGAATGGCCAGGTGGCTCAACAGGGAGGTACACGAATAGCTAAATTAGCGAATGGCCAATTAGTTTATAATGTATTAAATAATAAGCCAACCGAAGTTACTTTCAATTCATTAACTACTCCACGGGGAGGACAATTCAAGCTTACTTTACCAGATGGCAGTAAGGTATGGCTTAATGCAGTCTCTTCCATTAAATACCCTACGGCATTTATTGGTAGTGAAAGAAAGGTTGAAATATCAGGCGAAGCATATTTTGAAATAGCGCATGATGCGGCAAAACCATTTAAGGTAAGTGTAAATGGAATGGTGGTGAAGGTATTAGGAACACATTTTAACATCAATGCGTATAATGATGAAGCCTCTGTGAAGGCTACCCTGCTTGAAGGAAGCATAAACCTTACAAAAGATAATGCTACAATTACACTAACGCCAGGCCAGCAGGCCCAGGTTAGGAATGGAAGAGATATTAAAGTTGTTAATGATGTGGATATTGACCAGGTAGTAGCGTGGAAGAATGGATATTTTTCTTTTAACAGGGTAGGTTTACAAACGGTGATGCGGCAAATAGCAAGATGGTATGATGTAGAGGTAAGTTATAAAGGAGAAATACCTGAACGGCAATTTGGCGGTAAAATTGACCGGAATAGTAGCATATCGGAAGTATTAAAAATCCTGGAAGAGAGTAAAGTACATTTTAGAATTGATGAGAAAAAGATAATAGTAAGTCCATGA
PROTEIN sequence
Length: 399
MQQTELKTFFEKFDLGTNTEEEHQQFIEWLKTAPIEDVKAILEEYHINVNRDRSPNDEVDLNLVSQIEAALDQYELGKELRYVNDKKISWRFFSRVAAALVILISGIAIYFALKTNRHNTIAKAPSLQLKNEVVPGGNKAILTLSDGATIILDDAKNGQVAQQGGTRIAKLANGQLVYNVLNNKPTEVTFNSLTTPRGGQFKLTLPDGSKVWLNAVSSIKYPTAFIGSERKVEISGEAYFEIAHDAAKPFKVSVNGMVVKVLGTHFNINAYNDEASVKATLLEGSINLTKDNATITLTPGQQAQVRNGRDIKVVNDVDIDQVVAWKNGYFSFNRVGLQTVMRQIARWYDVEVSYKGEIPERQFGGKIDRNSSISEVLKILEESKVHFRIDEKKIIVSP*