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scnpilot_solids2_trim150_scaffold_355_curated

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_355_curated_1
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(152..922)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036293B6
Uncharacterized protein {ECO:0000313|EMBL:CDN31224.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
scnpilot_solids2_trim150_scaffold_355_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1083..2690
DNA (1608bp) protein (536aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMZ3_NIAKG
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEV96655.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_355_curated_3
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2995..3441
DNA (447bp) protein (149aa)
Cold-shock DNA-binding protein family n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11WH7_CYTH3
comB; cold-shock DNA-binding protein family protein
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABG58239.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
scnpilot_solids2_trim150_scaffold_355_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3558..5303)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NL30_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17132.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_355_curated_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5719..6300)
DNA (582bp) protein (194aa)
Putative uncharacterized protein id=2178258 bin=GWE2_Bacteroidetes_42_39 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_355_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6534..7811)
DNA (1278bp) protein (426aa)
Oxidoreductase domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NV10_9SPHI
Oxidoreductase {ECO:0000313|EMBL:AHF16295.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
oxidoreductase domain-containing protein
scnpilot_solids2_trim150_scaffold_355_curated_7
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7933..8394)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SE73_9FLAO
ATPase {ECO:0000313|EMBL:KGO96678.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
Activator of Hsp90 ATPase 1 family protein
scnpilot_solids2_trim150_scaffold_355_curated_8
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8543..9046)
DNA (504bp) protein (168aa)
OsmC-like protein n=2 Tax=Leptospira licerasiae RepID=I0XPB9_9LEPT
Peroxiredoxin {ECO:0000313|EMBL:KFC57790.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
OsmC family protein
scnpilot_solids2_trim150_scaffold_355_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9268..9657
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96781.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_355_curated_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9701..14059
DNA (4359bp) protein (1453aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP8_NIAKG
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:AEV96782.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
scnpilot_solids2_trim150_scaffold_355_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14065..15195
DNA (1131bp) protein (377aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP9_NIAKG
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEV96783.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_355_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15361..15894
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF57_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02677.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_355_curated_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15926..17248)
DNA (1323bp) protein (441aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS6_NIAKG
Putative RND-type efflux pump outer membrane protein {ECO:0000313|EMBL:GAO44455.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
outer membrane efflux protein
scnpilot_solids2_trim150_scaffold_355_curated_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17255..20344)
DNA (3090bp) protein (1030aa)
Acriflavin resistance protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS5_NIAKG
Acriflavin resistance protein {ECO:0000313|EMBL:KIC89941.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_solids2_trim150_scaffold_355_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20344..21417)
DNA (1074bp) protein (358aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS4_NIAKG
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEV98907.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_355_curated_16
unknown

Not on your lists

comp(21627..21722)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_355_curated_17
unknown

Not on your lists

comp(21676..21828)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_355_curated_18
unknown

Not on your lists

comp(21840..21971)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_355_curated_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22077..23327
DNA (1251bp) protein (417aa)
transporter n=1 Tax=Segetibacter koreensis RepID=UPI000381D427
Transporter {ECO:0000313|EMBL:KIC93645.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein
scnpilot_solids2_trim150_scaffold_355_curated_20
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23345..23704)
DNA (360bp) protein (120aa)
S23 ribosomal protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L102_HALH1
S23 ribosomal protein
S23 ribosomal protein {ECO:0000313|EMBL:AEE51589.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_355_curated_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23856..24533
DNA (678bp) protein (226aa)
Phosphonate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKC4_NIAKG
phosphonate-transporting ATPase; K02003 putative ABC transport system ATP-binding protein
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC90118.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_355_curated_22
unknown

Not on your lists

24688..24903
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_355_curated_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25003..27435
DNA (2433bp) protein (811aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAJ4_RUNSL
Cell division protein FtsX {ECO:0000313|EMBL:KIC93641.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_solids2_trim150_scaffold_355_curated_24
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27663..30062
DNA (2400bp) protein (800aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Galbibacter marinus RepID=K2PPX8_9FLAO
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EKF54615.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
antimicrobial peptide ABC transporter permease
scnpilot_solids2_trim150_scaffold_355_curated_25
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30310..32718
DNA (2409bp) protein (803aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360881D
hypothetical protein; K02004 putative ABC transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48367.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_355_curated_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32899..35286
DNA (2388bp) protein (796aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003660738
Uncharacterized protein {ECO:0000313|EMBL:KIC91292.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_355_curated_27
unknown

Not on your lists

35283..35456
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_355_curated_28
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35466..37892
DNA (2427bp) protein (809aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSU3_SOLCM
lipoprotein release ABC transporter permease
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:AFD05403.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_355_curated_29
unknown

Not on your lists

38021..38296
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_355_curated_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38277..40649
DNA (2373bp) protein (791aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLP5_CHIPD
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAO44886.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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