ggKbase home page

qs_1_scaffold_1525

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1525_1
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1..957)
DNA (957bp) protein (319aa)
Secreted protein containing DUF1080 n=1 Tax=Rhodopirellula europaea SH398 RepID=M5S0H6_9PLAN
Secreted protein containing DUF1080 {ECO:0000313|EMBL:EMB13975.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodo
secreted glycosyl hydrolase
qs_1_scaffold_1525_2
archaeon Loki, Lokiarchaeota, Archaea

Not on your lists

comp(1025..1339)
DNA (315bp) protein (105aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDH6_HALXS
Beta-galactosidase {ECO:0000313|EMBL:KKK41995.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
qs_1_scaffold_1525_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1727..3343
DNA (1617bp) protein (539aa)
sodium/glucose cotransporter
sodium/glucose cotransporter; K03307 solute:Na+ symporter, SSS family id=24657122 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sodium/glucose cotransporter {ECO:0000313|EMBL:ABC43875.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_1_scaffold_1525_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3732..4805
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B72844
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
qs_1_scaffold_1525_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5017..5436
DNA (420bp) protein (140aa)
30S ribosomal protein S6 n=2 Tax=Salinibacter ruber RepID=Q2S2U2_SALRD
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000313|EMBL:CBH24481.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_1_scaffold_1525_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5482..5697
DNA (216bp) protein (72aa)
rpsR; 30S ribosomal protein S18
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=24659315 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270, ECO:0000313|EMBL:CBH24482.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_1_scaffold_1525_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5789..6238
DNA (450bp) protein (150aa)
rplI; 50S ribosomal protein L9
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=24659316 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503, ECO:0000313|EMBL:CBH24483.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_1_scaffold_1525_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6392..6679
DNA (288bp) protein (96aa)
hypothetical protein
hypothetical protein id=24658080 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25283.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_1525_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6951..7652)
DNA (702bp) protein (234aa)
Asparaginase/glutaminase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI70_RHOMR
asparaginase/glutaminase
Asparaginase/glutaminase {ECO:0000313|EMBL:AEN74126.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
qs_1_scaffold_1525_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7691..8509)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCV0_RHOM4
hypothetical protein
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
qs_1_scaffold_1525_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8737..10023
DNA (1287bp) protein (429aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT5_RHOMR
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae se
qs_1_scaffold_1525_12
unknown

Not on your lists

10346..10609
DNA (264bp) protein (88aa)

This feature has no annotations

qs_1_scaffold_1525_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10803..11981
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B55CA1
yihY; YihY family protein
YihY family protein {ECO:0000313|EMBL:ABC44576.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_1_scaffold_1525_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12229..14460
DNA (2232bp) protein (744aa)
Surface antigen (D15) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT3_RHOMR
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AEN74080.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="
qs_1_scaffold_1525_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15319..20067
DNA (4749bp) protein (1583aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B493E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45887.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_1525_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20163..20966
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT1_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47603.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_1525_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21055..21981
DNA (927bp) protein (309aa)
ABC transporter related protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG48_RHOM4
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY47604.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_1_scaffold_1525_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22087..23262
DNA (1176bp) protein (392aa)
Mammalian cell entry related domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG49_RHOM4
mammalian cell entry domain-containing protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:ACY47605.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rh
qs_1_scaffold_1525_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23423..23869
DNA (447bp) protein (149aa)
transporter
Transporter, putative {ECO:0000313|EMBL:ABC44512.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
transporter id=24659287 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Displaying 19 items

View Taxonomy