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RifSed_csp2_16ft_3_scaffold_2683_4

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 5909..7075

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 387.0
  • Bit_score: 629
  • Evalue 1.80e-177
Probable tRNA sulfurtransferase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXG1_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 387.0
  • Bit_score: 427
  • Evalue 7.30e-117
thiazole biosynthesis/tRNA modification protein ThiI similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 387.0
  • Bit_score: 427
  • Evalue 2.10e-117

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1167
TTGAAAAATCCCAATATAATTCTGGTCAGATATGACGAACTTGCTCTGAAGAGCAAGAAAGTCAGGGCAATGTATGAAAGTATCCTTATCAGGAATTTGAGAGCAATGCTCAATGCAGATGGCAGTTCGTATTCAGAGATAGAAAAGGAGATGGGCAGGATCTTCATACATTCTCAGGATCACAATGCCCTGAAAAGCGCAGTGAAAGTCTTTGGAGTGGTCTCTGCAAGCCCTGTCTCTTCCTGCGATCCATCTCTTTCCTCGACCTCAGAATTATGTGCCCAGGTGGGTGCAGATATGCTCAAAGAAGGGCAGTCCTTTGCGATCAGGGCAAGGAGGGCAGGAACACATGATTTCTCATCCAGGGATGTAGCCAGAGCCTGCGGAGATGCGGTATTGCAGAGGATGAAAAGAGGTGTCAGGGTTGATCTTGACAATCCGGATGTTGAGATCTCTGTGGAGGTCAGGCAGGAAAAAGGCTACGTTTTCACGGAATCAGTAAAAGGTGTGGGAGGTCTTCCGAACGGGACCCAGGGAAAGATGGTGGCGCTCATCTCAGGCGGCATAGATTCTCCGGTCGCAGCCTGGCTGATGATGAAACGCGGGTGCGAGATAATACCCCTGTACCTCAATAACGAGCCTTTCTCTGATGGGACGACACGCAACAGAGCAATGCAGTGCATAGACGTGCTCCAGAAATGGTCGCCGCATAAAAGACTTACTGTTTACGAGGCGCCTCACGGCGAAAATCTCCTGGCATTCCTGAACAGCTGCGATAACAGGCTCAACTGCGTACTGTGCAGGAGGATGATGTACAGGATCGCAGGAGAAGTTCTAAAGCTTGAAGGGGCTCACGGGATAATCACAGGCTCTTCGCTCGGTCAGGTCGCTTCGCAGACATCGCAGAACATGCTTGCAGAGATGCATGGAATGGAATATCCGATATATCATCCACTCATCGGGCTTGATAAACTTGAGATCACAGATATTGCAAGGAGGATAGGCACTTTGGAGCCTTCAACAAAACCAGCGACATGCTGCATGGCTGTACCTGAGTATCCATCCACAGCAGCAAGACTTCATGATGTCACAGATGCAGAAAGGCAAATAGATGTACCCTTACTTGTTGAATCTGCGATGAAGGACATCAAAAAATTTTCCCTTTGA
PROTEIN sequence
Length: 389
LKNPNIILVRYDELALKSKKVRAMYESILIRNLRAMLNADGSSYSEIEKEMGRIFIHSQDHNALKSAVKVFGVVSASPVSSCDPSLSSTSELCAQVGADMLKEGQSFAIRARRAGTHDFSSRDVARACGDAVLQRMKRGVRVDLDNPDVEISVEVRQEKGYVFTESVKGVGGLPNGTQGKMVALISGGIDSPVAAWLMMKRGCEIIPLYLNNEPFSDGTTRNRAMQCIDVLQKWSPHKRLTVYEAPHGENLLAFLNSCDNRLNCVLCRRMMYRIAGEVLKLEGAHGIITGSSLGQVASQTSQNMLAEMHGMEYPIYHPLIGLDKLEITDIARRIGTLEPSTKPATCCMAVPEYPSTAARLHDVTDAERQIDVPLLVESAMKDIKKFSL*