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RifSed_csp2_16ft_3_scaffold_4563_5

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 2049..3056

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RL3_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 337.0
  • Bit_score: 433
  • Evalue 1.20e-118
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 335.0
  • Bit_score: 605
  • Evalue 4.10e-170
rpl3p; 50S ribosomal protein L3P similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 337.0
  • Bit_score: 433
  • Evalue 3.30e-119

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1008
ATGTCACATCCTCACAGACCAAGACGCGGGTCGATTGCCTACAGCCCGCGGGTAAGAGCACGGAGCGAAATCCCACGTGTGAGAGCATGGCCTCAGCAGACGCAGCCGAAGCTGTTAGGTTTCGCTGGCTATAAAGCAGGCATGACACATGTAATAATGACCGATGATGTACCCAACAGTCTGACCACAGGCATGGAGACCTCGGTGCCTGTGACCGTTCTGGAGGTTCCTCCGATGAAGGTTGCGGGTATAAGGGTCTATAACAGCACAACCTATGGGGCACATGCAATCGCAGAAGCATGGACTAAAGAGCTTGATAAGGAACTCAACCGTGCGATCATGGTTCCAAAGAAACACGACCTTCCTGCAGCGCTTTCTAAGATCGAACAGCTCATCAGGGACGGAGTTGCAAAGGATCTGAGAGTAATCATGTACACCTTGCCCGAAAAAGTAACAGGCATCCCGAAGAAGAAACCAGAACTGATGGAAAACAACATCGGGGGAACTGATCTTAAGGCACGTTTCGAATATGCAAAGACGCTGCTTGGAAAGCCTGTCAACATAAATGATGTGTTCAATAACGGGGATATCATAGATATTCTTGCAATAACCACAGGCAAAGGGCTGCAGGGGCCTGTGAAGAGATGGGGAATACAGATCCAGAAATCCAAACACTCAAGGGCAGGCAGCGTGAGGGAGATAGGGACACTGGGACCATGGCACCCTTCACATGTGAGCTGGCGCGTGCCTCAACTGGGGCAGACAGGCTATCATCAGAGGACAGAGTTCAACAAGAGGATAATGCAGATCGGAAAAGATGGGAAAAATGTGACCCCTGAGGGTGGAGTGTTGAACTACGGTATTATCAGGAACGATTATATAATCATCAAAGGAAGCGTACCCGGTCCTGCCAAAAGGCTCGTGCGAATGCGACCTGCTATAAGATTAAAGAAGCAACTGCCCGTTCCCGAGATATCATATATAAGTCTTGAGTCAAAGCAGGGGTGA
PROTEIN sequence
Length: 336
MSHPHRPRRGSIAYSPRVRARSEIPRVRAWPQQTQPKLLGFAGYKAGMTHVIMTDDVPNSLTTGMETSVPVTVLEVPPMKVAGIRVYNSTTYGAHAIAEAWTKELDKELNRAIMVPKKHDLPAALSKIEQLIRDGVAKDLRVIMYTLPEKVTGIPKKKPELMENNIGGTDLKARFEYAKTLLGKPVNINDVFNNGDIIDILAITTGKGLQGPVKRWGIQIQKSKHSRAGSVREIGTLGPWHPSHVSWRVPQLGQTGYHQRTEFNKRIMQIGKDGKNVTPEGGVLNYGIIRNDYIIIKGSVPGPAKRLVRMRPAIRLKKQLPVPEISYISLESKQG*