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RifSed_csp2_16ft_3_scaffold_4563_17

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 8120..8812

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4e Tax=Methanolobus psychrophilus R15 RepID=K4MD48_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 231.0
  • Bit_score: 253
  • Evalue 1.50e-64
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 230.0
  • Bit_score: 388
  • Evalue 4.10e-105
30S ribosomal protein S4e similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 231.0
  • Bit_score: 253
  • Evalue 4.10e-65

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 693
ATGGGAAAACATCAGAGAAGAATGGCATCCCCGACATCATGGCCTGTGGAAAGGAAGACCCACGCATGGGTTGTGGGAGCAAATGCAGGTTCTCATTCAAAGGAAACAGGAATTCCACTGCTTGTGGTCGTGAGAGACCTTCTTAAAATCGCGAACAGCAGCAAGGAAGCCAAACGGATCATCAACGAGGGAAGCATTCTGGTAGATGGAAAGACCAGAAAGGATTACAAATATATTGCGGGTCTCTTCGATATCATCTCGCTTCCTGCACTGAATGAACATTACAGGGTTCTGCTTGATCATAACAACAGGTTCAAACTGTTCAAGGAAAGCGCAGATGCAAAGAAGCTGTGCAGGATCAATAACAAGACCATCATTAGAAAAGGAGCGGTTCAGCTCAATCTGCATGACGGCAGCAATATCATCGCGACAAACGAGTTCAGGACTTTTGATACACTGATGTTATCTATCCCGGACCGAAAGATTGCAAGGCATATACCATATAGACCGGGGAATCTTGCGTTGATCGTCGGCGGAGAACATTCAGGAGAGAAAGGCAAAATAAAGCAGATCCGAAAAGTAAGGGGTTCTGGAACGAACATGGTGGTACTATCAAATGATAAAGAATTTGAGACCATCGAAGATTACGTATTTGTTGTCGGCGAGTCAGCTCCGGAATTAAAGGTGGTTTAA
PROTEIN sequence
Length: 231
MGKHQRRMASPTSWPVERKTHAWVVGANAGSHSKETGIPLLVVVRDLLKIANSSKEAKRIINEGSILVDGKTRKDYKYIAGLFDIISLPALNEHYRVLLDHNNRFKLFKESADAKKLCRINNKTIIRKGAVQLNLHDGSNIIATNEFRTFDTLMLSIPDRKIARHIPYRPGNLALIVGGEHSGEKGKIKQIRKVRGSGTNMVVLSNDKEFETIEDYVFVVGESAPELKVV*