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RifSed_csp2_16ft_3_scaffold_4563_24

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 11356..11874

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18P Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMP5_METZD similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 195
  • Evalue 2.70e-47
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 172.0
  • Bit_score: 282
  • Evalue 4.00e-73
50S ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 195
  • Evalue 7.70e-48

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 519
ATGGCGACAGGGGCAAGATACAAAGTACAGTTCAGACGGATAAGAAAAGGCAGAACCGACTACAGGGCCAGGAAGCAAATGCTCATATCAAGAAAACCCAGGCTTGTTGTGAGAAAGAGTCTGAACCACACCAATATGCAGTTAATTTTACCTGCGAAAGAAGGAGATGTTACACTGGCATCTTCGAATACAGCCGAGTTAAAAAAATACGGTTACACCGGCGGAACAGGAAATATCCCGTCAGCATATCTGGCAGGATTATTGCTTGGATACCGTGCAAAGAAAATGGGACATGCTGAAGCCATACTGGATATAGGGCTGTATCAGACAACAAAAGGCGGCATAATATTTGCAGCCATGAAAGGCGCTATTAATGCCGGGCTTGAGATTCCGCATGATCCGGCGATATTCCCTTCAGATGATCGTATTGCTGGCAAACATATTGACAAATTCAGAAAAACCAACATCAGTGAGCAATTAGAGGCAGTGAAGCAGAAAATCCAGGGAGAATTCAGGTGA
PROTEIN sequence
Length: 173
MATGARYKVQFRRIRKGRTDYRARKQMLISRKPRLVVRKSLNHTNMQLILPAKEGDVTLASSNTAELKKYGYTGGTGNIPSAYLAGLLLGYRAKKMGHAEAILDIGLYQTTKGGIIFAAMKGAINAGLEIPHDPAIFPSDDRIAGKHIDKFRKTNISEQLEAVKQKIQGEFR*