ggKbase home page

RifSed_csp2_16ft_3_scaffold_4563_26

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 12501..12962

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30P Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAK1_METCZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 153.0
  • Bit_score: 191
  • Evalue 4.50e-46
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 153.0
  • Bit_score: 272
  • Evalue 2.20e-70
rpl30p; 50S ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 153.0
  • Bit_score: 191
  • Evalue 1.30e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 462
ATGTACGCAGTAGTAAGGCTAAGAGGCGGCGTAAAAACCAGGCAGGATATCAGGGATACTCTGAGCATGTTGCATCTTGACAGGATAAATCATTGCGTGATCGTGCCTGACACCCCGAATTATAATGGTATGATCCAGAAGGCAAAGGACTATGTCGCCTGGGGGCAGATCAGCCCTGAGACACTGGCAAAGATGTTGAAAAATAGAGGCAGACTTGAAGGAAGGAAAACTCTGACCGAGGAATACCTTGCCATGAACACAAAGTTCAAATCATTCGATGAGCTTGCAAAAGCTATTTGCGAAGGGAAAGCCTCTATAGGTGACGTTCCTAAAATGAAGCAGGTTTTCAGGTTGCATCCTGCAAGAAAAGGTCTTAAGGGTACTAAGAGAACCTTCCTGGAAGGAGGAGACCTGGGATTTCACGGAACTGAAATAAATTCCCTGCTGAACAAAATGAGGTAA
PROTEIN sequence
Length: 154
MYAVVRLRGGVKTRQDIRDTLSMLHLDRINHCVIVPDTPNYNGMIQKAKDYVAWGQISPETLAKMLKNRGRLEGRKTLTEEYLAMNTKFKSFDELAKAICEGKASIGDVPKMKQVFRLHPARKGLKGTKRTFLEGGDLGFHGTEINSLLNKMR*