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RifSed_csp2_16ft_3_scaffold_5857_2

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 775..1512

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase sliding clamp Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVK8_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 245.0
  • Bit_score: 309
  • Evalue 1.80e-81
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 245.0
  • Bit_score: 418
  • Evalue 5.10e-114
proliferating cell nuclear antigen PCNA similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 245.0
  • Bit_score: 309
  • Evalue 5.20e-82

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 738
ATGTTCAAGGCACTGATCGGCGCAGAAAAACTGAAGGACGCTATCGAAGCTATCTCTTCACTGGTTGATGAAGCTAAATTCAAACTTACCGCAGATGGAATAAACGTCAGAGCAGTGGATCCCGCCAATGTCGCCATGGTGAGTCTTGAGCTCACAAAAGATGCGTTCGATTCCTTCGAAGCGACTGAAGGAGAAATCGGAATAGACCTTACGAAAATGAACGATATAATGGAAATGGCTGAGAAGGATGACAGGATAGAAATTGATCTTGATGAAAATGCTCACAAACTCATAGTCAGGATGCGTGAGCTCTCTTATACTATGTCTTTACTTGATCCCTCTTCTATCAGAAAAGAGCCTAAAGTCCCTGCCCTGGATCTGCCAGTCCATATCGTTGTGCGGGGTGAAGATCTAAAACGCGCTGTAAAGGCTGCTGAGAAAGTGAGCGATTACATGTCCATGGGGATAAGTGGAGAGGTTTTTTTTATGGAAGCCGAGGGGGATACGGACAACGTCAGGCTTGAAATGACAAAAGATCAGTTGATAGATCTCAAATCAGGGGAAGCAAGGTCTCTGTTCTCGCTTGACTATCTTACAGACATCAGTAAGATCGCGGCAAAAGCCAGCGAGGTAACAATTGATCTTGGTAAGGATTTCCCTCTGAAAGTCAGGTTCAAGATCGCAGAGGGACATGGCGAGGTCAGTTATATGCTGGCTCCCAGGGTTGAATCAGAATAA
PROTEIN sequence
Length: 246
MFKALIGAEKLKDAIEAISSLVDEAKFKLTADGINVRAVDPANVAMVSLELTKDAFDSFEATEGEIGIDLTKMNDIMEMAEKDDRIEIDLDENAHKLIVRMRELSYTMSLLDPSSIRKEPKVPALDLPVHIVVRGEDLKRAVKAAEKVSDYMSMGISGEVFFMEAEGDTDNVRLEMTKDQLIDLKSGEARSLFSLDYLTDISKIAAKASEVTIDLGKDFPLKVRFKIAEGHGEVSYMLAPRVESE*