ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RifSed_csp2_16ft_3_scaffold_7524_8

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 6153..6704

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKI2_METZD similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 159.0
  • Bit_score: 157
  • Evalue 8.70e-36
Uncharacterized protein {ECO:0000313|EMBL:KCZ72726.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 153.0
  • Bit_score: 210
  • Evalue 1.60e-51
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 159.0
  • Bit_score: 157
  • Evalue 2.50e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 552
ATGGTTATATTCTCACACGTAGATGAAAGGCCGATGGCAAATTATCGGCTTGTCAGGGACATTCCAGTTTTTATCGATGATAAGCGAGAAGCATCAATGGTTGAGATGGGAAGGGATGATATAACGGTTTCATGTACACAGGGTAGAATCGTGGTATGGTTTGGCAGGCAGGTCGGTGAATCCATAATCCACCAGGTCATTTTCGGGATATCCTGTGTGGATTCATCTATATACCATGAACTGGAAGTGATATGCGACTTTAAGACAATCGGCGAATACGAGGATATGGGCTGTATTCTGGTATCGTATTCGAAAACCAGGGGAGGATACAGGACGATGTTCAATATCCCGTTTTCAAGGAAATTCGCGCTTGACCATTTCGTAAAATCCATCGTTAAATCGCTCAGAGAAAAGGATATAAAGAAAACTCTTCACTGGGATGGTGATCTGGACAGGATAATTCTGATCTATAATGAACTGAAAAGGCTTGATGGATGGGATATAAAGCGAATTGATTATAAGAATAAGAATGAAAAAGAGGTCTCTAAATGA
PROTEIN sequence
Length: 184
MVIFSHVDERPMANYRLVRDIPVFIDDKREASMVEMGRDDITVSCTQGRIVVWFGRQVGESIIHQVIFGISCVDSSIYHELEVICDFKTIGEYEDMGCILVSYSKTRGGYRTMFNIPFSRKFALDHFVKSIVKSLREKDIKKTLHWDGDLDRIILIYNELKRLDGWDIKRIDYKNKNEKEVSK*