ggKbase home page

RifSed_csp1_16ft_3_scaffold_19046_3

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: comp(1615..2589)

Top 3 Functional Annotations

Value Algorithm Source
gcp; DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57) similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 326.0
  • Bit_score: 488
  • Evalue 8.30e-136
UPI0003D1B28B related cluster Tax=unknown RepID=UPI0003D1B28B similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 330.0
  • Bit_score: 491
  • Evalue 4.50e-136
Metallohydrolase, glycoprotease/Kae1 family {ECO:0000313|EMBL:KCZ71999.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 323.0
  • Bit_score: 556
  • Evalue 1.60e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 975
ATGTCAGGAATTTCAATATTAGGCATTGAAGGAACAGCATGGAACCTGAGCGCTGCGATCGTTGATGAAATCGATGTCATTGCTGAGACCACGGCTACGTACAGGCCACCTGCAGGCGGTATACATCCGCGTGAGGCAGCGCAGCATCATGCGAACCATATTACTGAGGTTGTCAGGGAAACATTAAAAAAAAGCCGGAGGAATATAGATGCAGTGGCTTTTTCTCAAGGTCCAGGTCTCGGACCGTGTCTTCGCACAGTGGCTACCGCTGCAAGGGCGCTTGCGCTATCAATGGATGTCCCTCTAATCGGCGTCAATCACTGCATAGCACATATCGAGGTGGGGAGATGGAAGACACCGGCACGCGACCCTGTCACGCTGTATGTGAGCGGCGCCAATTCCCAGGTGCTTGCATACAGGGCTGGACGCTACAGGGTCTTTGGTGAGACGCTGGATATAGGGATCGGGAATGCTCTTGACAAATTCGCCAGATCTGTGGGATTATCTCATCCTGGAGGTCCGAAGGTGGAAGAGCTGGCAAGGGGGGCTTCTCGATATGTTCCCCTTCCTTATACGGTGAAGGGAATGGACTTTTCATTCTCAGGTCTTTCGACTGCGGCAAAAGAATCCGTCAAGAGCTACCCCCTGCCTGATGTTTGCCACTCCTTCCAGGAGACTGCGTTCGCGATGCTTGTAGAGGTAACGGAACGGGCTGTTGCGCATACTGGAAAGAACGAGGTCTTACTGGCAGGAGGAGTGGGCGCAAATTCGCGTTTAAGGCAGATGCTGGAGATAATGTGCCAGGCCAGAGGTATCAGGTTCTTTGTGCCTGAGAAGCGTTATATGGGCGACAACGGCGCTATGATAGCATATCTTGGCCTGTTAATGCATAAAGCCGGATACCAAACCCGGATATCCGACTCAGGGGTCAATCCCAGCTACAGGCCGGATGATGTAGAGGTAATATGGCTGTAA
PROTEIN sequence
Length: 325
MSGISILGIEGTAWNLSAAIVDEIDVIAETTATYRPPAGGIHPREAAQHHANHITEVVRETLKKSRRNIDAVAFSQGPGLGPCLRTVATAARALALSMDVPLIGVNHCIAHIEVGRWKTPARDPVTLYVSGANSQVLAYRAGRYRVFGETLDIGIGNALDKFARSVGLSHPGGPKVEELARGASRYVPLPYTVKGMDFSFSGLSTAAKESVKSYPLPDVCHSFQETAFAMLVEVTERAVAHTGKNEVLLAGGVGANSRLRQMLEIMCQARGIRFFVPEKRYMGDNGAMIAYLGLLMHKAGYQTRISDSGVNPSYRPDDVEVIWL*