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js4906-27-3_S30_scaffold_177_43

Organism: js4906-27-3_S30_Melainabacteria_curated_32_34

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(46767..47654)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Brachyspira sp. CAG:484 RepID=R5HH74_9SPIR similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 295.0
  • Bit_score: 396
  • Evalue 1.40e-107
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 295.0
  • Bit_score: 396
  • Evalue 1.90e-107
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 285.0
  • Bit_score: 226
  • Evalue 7.00e-57

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Taxonomy

Brachyspira sp. CAG:484 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGATGAGAGAAGAAGTTTTGATGAAGTCAACGACTTCAAATTCTGCAAGCAATTCTGATGATATGCTTACTTGTTATTTGAGAAGAATTTCTCATATAAGATCAATTTCCGCAACAGAAGAAAAAGTTCTTGCGAAAAAGGCTCAAGAAGGGGACTTTGAAGCAAAAAGAAAATTGGTTGAGGCTAATTTAAAATTAGTTTTAACAATTGCTAAAAAAGCAATTCATGTTTCAAAAATACCTATGATTGATTTAATCCAAGAAGGTAATTTGGGACTTATGGTTGCAGTTGAAAAATTCAATTGGAAGTTGGGATATAAATTTTCAACTTATGCAAGTTGGTGGATTAAGCAAGCAATGTTTAAAGCTATTTCTGAACAAGGTCATTGCATGAAAATACCTGTTTATATTCAAGAAACATTGTCAAAATTCTCTAAAGTAAAAGAAGAAATGGAAAGAGAATATAACTGCAAAGTTAAAAATGAAGATGTTGCTGAAAGAATAAATGTACCTGTTGACAAAATTGAAACATATTTAAGTGCTTATTCAAAAACAATTTCTATTGAAGGTGGTTTCACAAGCGAAGACAAAAAAGATATGGATGTTGCAGACATTCTTGAAGATAAAAATGCAGATGTTTATTCAAGTGTAGAATTTGAATGTTTGAAAAAAGATATAGAAAAAGTTATTTCTGTACTTAAAGACAGAGAACAAAGTGTAGTACAAATGAGATACGGCTTAGGCAATTTCGCAAAGAAGACATTGGAAGAAATCGGCTCTCTTTACGGTGTAACAAAAGAATGTATTCGTCAAACTGAATTGAGAGCATTAAGAAGAATGCGTTCTTCAAATATCGGTCAAGAAGTTTTGGCTTGTTATTTACACTAA
PROTEIN sequence
Length: 296
MMREEVLMKSTTSNSASNSDDMLTCYLRRISHIRSISATEEKVLAKKAQEGDFEAKRKLVEANLKLVLTIAKKAIHVSKIPMIDLIQEGNLGLMVAVEKFNWKLGYKFSTYASWWIKQAMFKAISEQGHCMKIPVYIQETLSKFSKVKEEMEREYNCKVKNEDVAERINVPVDKIETYLSAYSKTISIEGGFTSEDKKDMDVADILEDKNADVYSSVEFECLKKDIEKVISVLKDREQSVVQMRYGLGNFAKKTLEEIGSLYGVTKECIRQTELRALRRMRSSNIGQEVLACYLH*