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PLM4_5_b1_sep16_scaffold_5183

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_5183_1
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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2..1606
DNA (1605bp) protein (535aa)
Glycosyl hydrolase Tax=uncultured Acidobacteria bacterium RepID=H5SPP3_9BACT
Glycosyl hydrolase, BNR repeat precursor
Glycosyl hydrolase, BNR repeat {ECO:0000313|EMBL:AIE84715.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM4_5_b1_sep16_scaffold_5183_2
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(1619..4408)
DNA (2790bp) protein (930aa)
hypothetical protein Tax=Alistipes sp. AP11 RepID=UPI00035F2ED5
glycoside hydrolase
Tax=CG_Arma_01
PLM4_5_b1_sep16_scaffold_5183_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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4599..5111
DNA (513bp) protein (171aa)
GCN5-related N-acetyltransferase domain protein Tax=mine drainage metagenome RepID=T1B256_9ZZZZ
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_5_b1_sep16_scaffold_5183_4
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

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5350..6033
DNA (684bp) protein (228aa)
malate dehydrogenase (EC:1.1.1.38)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00037DC781
Tax=CG_Delta_02
PLM4_5_b1_sep16_scaffold_5183_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5979..6695
DNA (717bp) protein (239aa)
Malic enzyme {ECO:0000313|EMBL:CDM67002.1}; EC=1.1.1.38 {ECO:0000313|EMBL:CDM67002.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
malate dehydrogenase (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate decarboxylating) bin=GWF2_Methylomirabilis_70_14 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PLM4_5_b1_sep16_scaffold_5183_6
GWC2_OP9X_49_35_curated, OP9X, Bacteria

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6705..7718
DNA (1014bp) protein (338aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CYG8_9BACT
dienelactone hydrolase-like protein
Tax=GWC2_OP9X_49_35_curated
PLM4_5_b1_sep16_scaffold_5183_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8088..11183
DNA (3096bp) protein (1032aa)
Histidine kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XB09_9BACT
Histidine kinase {ECO:0000313|EMBL:EEF63194.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component regulator, sensor protein
PLM4_5_b1_sep16_scaffold_5183_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11207..11536
DNA (330bp) protein (110aa)
Response regulator receiver protein Tax=Pedosphaera parvula Ellin514 RepID=B9XAK8_9BACT
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM4_5_b1_sep16_scaffold_5183_9
unknown

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comp(11451..11741)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_5183_10
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(11924..13333)
DNA (1410bp) protein (470aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI000299E717
biopolymer transporter Tol
Biopolymer transporter Tol {ECO:0000313|EMBL:AHF93669.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
PLM4_5_b1_sep16_scaffold_5183_11
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(13349..13705)
DNA (357bp) protein (119aa)
Dihydrodipicolinate synthase Tax=Opitutaceae bacterium TAV5 RepID=H1IK51_9BACT
dihydrodipicolinate synthase
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AHF93111.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
PLM4_5_b1_sep16_scaffold_5183_12
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13678..14307)
DNA (630bp) protein (210aa)
dihydrodipicolinate synthase Tax=Verrucomicrobium spinosum RepID=UPI0001744E3A
dihydrodipicolinate synthase
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_5_b1_sep16_scaffold_5183_13
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14304..14750)
DNA (447bp) protein (149aa)
major facilitator transporter bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
sugar phosphate permease
Tax=CSP1_8_Deltaproteobacteria
Displaying 13 items

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