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PLM4_5_b1_sep16_scaffold_1679_2

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 619..1194

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-recycling factor Tax=Pedosphaera parvula Ellin514 RepID=B9XIZ1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 186.0
  • Bit_score: 265
  • Evalue 2.40e-68
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 186.0
  • Bit_score: 265
  • Evalue 3.30e-68
frr; ribosome recycling factor Frr similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 180.0
  • Bit_score: 183
  • Evalue 3.30e-44

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 576
ATGGTCCCAACCAATATGGCACTGGACGACTTTTTACTCGAGGCGGAAGAAAAAATGAGCAAGACCGAGAACGTCTTGGTGACGGAGTTCGCCGGCGTGCGAACCGGGAAAGCCTCGGCCGCTCTCGTGGAGAACATCGTTGTGGAGGTGTACGGAGCCCAGATGCGAATCCGGGAGCTGGCCGGCATTACCACCCCTGAGGCGCGCACGCTGAACATCCAGCCGTGGGACGCCAATTCGCTGCACTCCATTGAAAAGGCGATCCAAAAAGCCAACCTGGGTCTAACACCCTCGATCCACGGCAAGTCGATCCGGATTTTCTTTCCCGAGCTGAGCCAGGAACGGCGCCAGGAATTCGTGAAAATCATTCGCAAGATGGCCGAGGACGGCCGCGTGGCCATTCGCCACGTCCGGCGCGACGCCATGGACGCCCTCAAAAAGCACGGACACGACAGCGGCGTGACGGAGGATGACGTGAAGCACGCCGAGAAAGAACTTCAGAAGCTCACGGACGAATACACCGGCAAGCTCGACCAGCACCTGGCCCACAAAGAAAAAGAAATAATGACGGTCTAA
PROTEIN sequence
Length: 192
MVPTNMALDDFLLEAEEKMSKTENVLVTEFAGVRTGKASAALVENIVVEVYGAQMRIRELAGITTPEARTLNIQPWDANSLHSIEKAIQKANLGLTPSIHGKSIRIFFPELSQERRQEFVKIIRKMAEDGRVAIRHVRRDAMDALKKHGHDSGVTEDDVKHAEKELQKLTDEYTGKLDQHLAHKEKEIMTV*