ggKbase home page

PLM4_5_b1_sep16_scaffold_5717_11

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 12732..13331

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease HIII {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088219}; Short=RNase HIII {ECO:0000256|HAMAP-Rule:MF_00053};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088223};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 199.0
  • Bit_score: 301
  • Evalue 7.40e-79
rnhB_2; ribonuclease HIII (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 186.0
  • Bit_score: 147
  • Evalue 3.60e-33
Ribonuclease HIII Tax=Pedosphaera parvula Ellin514 RepID=B9XFP6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 199.0
  • Bit_score: 301
  • Evalue 5.30e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 600
GTGATCAAGGCCTGGAAAGACTCCGGGATTCGCGATTCCAAGAATATCTCCAGCGACAAGAAGATACGGGACCTGGCGGAATTAATCCGCAAGACACCCGGCTGCGTCTGCACCGTGGTGCCCATCGGCAACGAGGCCTATAACCGACTCTATGCCAAGATGGAAAGCGTCAATTCCATGCTGGCCTGGGGCCACGCGCGGGTGATTGAGAATTTGATGGGGCAAAAGCACCGCATGACGCCTCCGCCGGTGCGAGCCATCAGCGACCAGTTTGCGCACAACAAGGCAACCGTGGCCAAAGCGCTGATGCCGCTGGGCCGCAGCATCGAACTGGTGCAGCGGCACAAAGCGGAAGAGGACATCGCGGTAGCCGCGGCCTCGATACTCGCGCGCAACGAATTCGTTACCCGCCTGGCGGACCTCGGAAAATCAAGGGGCACGGAATTGCCAAAAGGAGCCGGCGCCCAGGTGGACCAGGTGGCGAAAGAACTCGTGGCCAGGAACGGCGCCGAAGTGCTCGCCAAAATCGCCAAAACGCACTTCCGCACCGCGCTTAGGGCCCAGGGCCTGCCAGAACCGCCGCGCAAGGCATGGAAGTAG
PROTEIN sequence
Length: 200
VIKAWKDSGIRDSKNISSDKKIRDLAELIRKTPGCVCTVVPIGNEAYNRLYAKMESVNSMLAWGHARVIENLMGQKHRMTPPPVRAISDQFAHNKATVAKALMPLGRSIELVQRHKAEEDIAVAAASILARNEFVTRLADLGKSRGTELPKGAGAQVDQVAKELVARNGAEVLAKIAKTHFRTALRAQGLPEPPRKAWK*