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PLM4_5_b1_sep16_scaffold_13677_9

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 10377..11432

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XBJ5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 338.0
  • Bit_score: 360
  • Evalue 1.30e-96
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF62880.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 338.0
  • Bit_score: 360
  • Evalue 1.80e-96
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 342.0
  • Bit_score: 204
  • Evalue 2.60e-50

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1056
ATGGCCGACTACGCCGAGAAACGCTCGGAGGCTGCTTTCGCCGAACTCGTCCGGCGCCACATCGATCTCGTCCATACTGCCGCGCTGCGGATGGTGGCGGACACCCACCTGGCAGAAGACGTTACGCAAGGCGCCTTCCTTGCTCTGGCAAAGAACGCCAGCCAACTCCTCGACCACCCCGTGCTGGCCGGCTGGCTTCATCGGACCGCCCAAAACCTTGCGGCCAATGCGGTCCGCACAGATGTCCGCCGCCGTGTCCGCGAACAGGAGGCCGCCGCCATGAACGAATTGCTCTCAAAGACGCCAGACCCCTCCTGGGAACACATCGCCCCGCATCTGGACTCCGCGCTTGGCGAACTGGCCGAACCCGAGCGCGATGTGGTGTTGCTGCGTTATTTCCAGAAAAAATCGGCCGAGGAAATGGGAGAAGTTTTGGGAATCAGCGCCGAAGCCGCTCAAAAACGCCTGAGCCGTGCTGTAGACCGGCTTCGTGACAACTTTGCCAGGCGCGGTGTGAGCGTCGGGGCCGGCGGTCTGGTTCTAATTCTTTCTGGTCACGCCGTCCAGGCCGCACCCGCGGGCCTCATGCTTGCTATTTCCACGGCCGCCACGCTTGTCGGCTCCACCCCCGCAACTGCCATCGCTATGACCGCACTCCAAAAGACTCTTGTAACCGCCACCGTCGTCGTGCTGACCGGAGCGGGAATCTACGAAGCCCGCCAGGCCTCGCAGATGCGCGCCCAGGTCGATATCCTCGCCCAACAGCAGGCGCCCCTTGCCGAACGAATCCAGCAACTGCGCCGCGAGCGGGATGACGCCACAAACCACCTTGCGGCCTTGCTTGAGGAGAAGCAGCGGCTGCCGGATAACTCCGCCGAGTTGCTCAAGTTGCGCGGAATGGCCGGAGTCGCCCGGCGCGCCATTGGCGAGGCCGAGGAACTGCGGGCGCAATTGGCGCGGCATTCCGCCGAAGCCACCACCAATCCCGTCACCGGTGCAATGGCCGATGCGATGAAGCAGGCCATGGAGCGACAACTCGAAGGCCGCATCGCCCGC
PROTEIN sequence
Length: 352
MADYAEKRSEAAFAELVRRHIDLVHTAALRMVADTHLAEDVTQGAFLALAKNASQLLDHPVLAGWLHRTAQNLAANAVRTDVRRRVREQEAAAMNELLSKTPDPSWEHIAPHLDSALGELAEPERDVVLLRYFQKKSAEEMGEVLGISAEAAQKRLSRAVDRLRDNFARRGVSVGAGGLVLILSGHAVQAAPAGLMLAISTAATLVGSTPATAIAMTALQKTLVTATVVVLTGAGIYEARQASQMRAQVDILAQQQAPLAERIQQLRRERDDATNHLAALLEEKQRLPDNSAELLKLRGMAGVARRAIGEAEELRAQLARHSAEATTNPVTGAMADAMKQAMERQLEGRIAR