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PLM3_127_b2_sep16_scaffold_4001

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4001_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1..123)
-----------------
DNA (123bp)
protein (41aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375B36D
AAA ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_127_b2_sep16_scaffold_4001_2
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(120..488)
-----------------
DNA (369bp)
protein (123aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YFH1_9BACT
VanZ like protein
Tax=RBG_13_Nitrospirae_43_8_curated
PLM3_127_b2_sep16_scaffold_4001_3
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(491..1126)
-----------------
DNA (636bp)
protein (212aa)
Outer-membrane lipoprotein carrier protein LolA Tax=Methyloglobulus morosus KoM1 RepID=V5C895_9GAMM
Outer-membrane lipoprotein carrier protein
Tax=RBG_16_Gammaproteobacteria_57_12_curated
PLM3_127_b2_sep16_scaffold_4001_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1172..3496)
-----------------
DNA (2325bp)
protein (775aa)
cell division protein FtsK Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000382E963
DNA translocase FtsK
DNA translocase FtsK {ECO:0000313|EMBL:ACL73084.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM3_127_b2_sep16_scaffold_4001_5

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comp(3567..4115)
-----------------
DNA (549bp)
protein (183aa)
Alanine dehydrogenase and pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:EQD62222.1}; EC=1.4.1.1 {ECO:0000313|EMBL:EQD62222.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase and pyridine nucleotide transhydrogenase Tax=mine drainage metagenome RepID=T1AXK7_9ZZZZ
PLM3_127_b2_sep16_scaffold_4001_6

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comp(4112..4654)
-----------------
DNA (543bp)
protein (181aa)
Alanine dehydrogenase and pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:EQD62222.1}; EC=1.4.1.1 {ECO:0000313|EMBL:EQD62222.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Alanine dehydrogenase and pyridine nucleotide transhydrogenase Tax=mine drainage metagenome RepID=T1AXK7_9ZZZZ
alanine dehydrogenase
PLM3_127_b2_sep16_scaffold_4001_7
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4840..5799
-----------------
DNA (960bp)
protein (320aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
thioredoxin reductase Tax=Thioalkalivibrio sp. ALJ7 RepID=UPI00037E3A39
thioredoxin reductase
PLM3_127_b2_sep16_scaffold_4001_8
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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5817..6980
-----------------
DNA (1164bp)
protein (388aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000369E8CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA91181.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
PLM3_127_b2_sep16_scaffold_4001_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6989..7675
-----------------
DNA (687bp)
protein (229aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
Leucyl/phenylalanyl-tRNA--protein transferase Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N5R7_PSEU6
leucyl/phenylalanyl-tRNA--protein transferase
PLM3_127_b2_sep16_scaffold_4001_10

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7770..7988
-----------------
DNA (219bp)
protein (73aa)
Translation initiation factor IF-1 Tax=mine drainage metagenome RepID=T1BBI4_9ZZZZ
Translation initiation factor IF-1 {ECO:0000313|EMBL:EQD67217.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
infA; translation initiation factor IF-1
PLM3_127_b2_sep16_scaffold_4001_11
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8002..10290)
-----------------
DNA (2289bp)
protein (763aa)
ATP-dependent Clp protease ATP-binding subunit ClpA Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YH99_THIV6
clpA; Clp protease ClpX
Clp protease ClpX {ECO:0000313|EMBL:AHK79262.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
PLM3_127_b2_sep16_scaffold_4001_12
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10293..10613)
-----------------
DNA (321bp)
protein (107aa)
ATP-dependent Clp protease adaptor protein ClpS Tax=mine drainage metagenome RepID=T1AY04_9ZZZZ
clpS; Clp protease ClpS
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_127_b2_sep16_scaffold_4001_13

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11027..12016
-----------------
DNA (990bp)
protein (330aa)
General secretion pathway protein C Tax=mine drainage metagenome RepID=T1C4R1_9ZZZZ
General secretion pathway protein C {ECO:0000313|EMBL:EQD80471.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
general secretion pathway protein C
PLM3_127_b2_sep16_scaffold_4001_14
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

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12055..13776
-----------------
DNA (1722bp)
protein (574aa)
General secretion pathway protein D Tax=sulfur-oxidizing symbionts RepID=G2FHJ0_9GAMM
General secretion pathway protein D {ECO:0000313|EMBL:EGW53750.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
general secretion pathway protein D
Displaying 14 items

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