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PLM3_60_coex_sep16_scaffold_10_74

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 84470..85501

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003715452 similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 231.0
  • Bit_score: 240
  • Evalue 2.50e-60
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO40152.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 221.0
  • Bit_score: 253
  • Evalue 2.30e-64
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 223.0
  • Bit_score: 227
  • Evalue 4.70e-57

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGCAGAGAACGAGCAGGCCCGAGGCCGCCTCGGCCGGGCTGGCGCCGACCCCCGCCAGGGCCCTGCAGCACAATGGTAAAGGCGCTGGCGAAGCCGACGACGGCCGCCAAAACGCCCGCGGAGATCGGCTGCGCGATGGAGCCGGTCGAAGATGTCGCGACGGCCATGGAATTCCCTATTCGTCCAATTGGTTCATCTACGCTGGCGGCGCGCAGAATAGGTGCTGCCGCGGTCACGGCCAAGGCCGGGAACCTTTCCCGGACTGCGGCATCAAATGTGTCAGTACAAAGGGACTTGGCATGAGCCTGCGCGCCGTCGACTACGAACAGCTTGACGATCTCGATCTCGCGGCGCGGGCGGCCAACCGCGATGCGGCCGCGATCCGCCTGATCACGACGCGGAACAACCAGCGCCTCTATCGCGCCGCCTGGAGCATCCTGCGCAACCGTGCCGATGCCGAAGATGCGGTGCAGGACGCCTATATCAAGGCGTTTGCCACGGGGGCGCCGTTCACCGGCAAATCCAGCCTGTCCACCTGGCTGACTCGCATCGCCGTCAACGAAGCACTGCAGCGGGTGCGCGCGGCCTCGCGCCGCCGGCGCACGCTCGAAGCGCAGGACGTGACGGTCCTCGAAACCTACCGGGAAAATTTCATGAGCGGGAACCCTCGATCGCAGACGCCGGAAACGCAGCTCGCGCGCCGGCAAATCGCCAGGATTCTGGAGACGGCGGTGTCGCAGCTTTCCGAAATCTTCCGCACCGTGTTCGTGCTGCGGGAGATCGAAGGGCTTTCGGTGGAGGAGACCGCCGAGATTCTCGACATCCTGCCGCAGACGGTGAAGACGCGCCATCTGCGCGCGCGGCGCAAGCTGATGCAGGCGCTGGATCCGGAGATCCGCACGGTGCTGACGGAGTCGTTCCAATTCGCCGGAGTCGATTGCGAGCGGTTGACGGCCCGCACGCTCGCTGCACTTGGAGTCGAAACGGGGCTTGAGCTTGACACAAACGGAGGAGACCAGAGCCATGAATAA
PROTEIN sequence
Length: 344
MQRTSRPEAASAGLAPTPARALQHNGKGAGEADDGRQNARGDRLRDGAGRRCRDGHGIPYSSNWFIYAGGAQNRCCRGHGQGREPFPDCGIKCVSTKGLGMSLRAVDYEQLDDLDLAARAANRDAAAIRLITTRNNQRLYRAAWSILRNRADAEDAVQDAYIKAFATGAPFTGKSSLSTWLTRIAVNEALQRVRAASRRRRTLEAQDVTVLETYRENFMSGNPRSQTPETQLARRQIARILETAVSQLSEIFRTVFVLREIEGLSVEETAEILDILPQTVKTRHLRARRKLMQALDPEIRTVLTESFQFAGVDCERLTARTLAALGVETGLELDTNGGDQSHE*