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PLM3_60_coex_sep16_scaffold_10_133

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 151967..152218

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq Tax=Fodinicurvata sediminis RepID=UPI0003B60269 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 84.0
  • Bit_score: 149
  • Evalue 1.40e-33
hfq; host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 80.0
  • Bit_score: 146
  • Evalue 2.60e-33
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 80.0
  • Bit_score: 146
  • Evalue 1.30e-32

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGGCTGGAGAAAAATCTCAGAATGTTCAGGACATATTCCTGAACAGCATCCGCAAGAACAAAACCCCCGTGACAATCTTCCTGGTGAATGGGGTGAAGCTGCAGGGGATCGTCACGTGGTTTGACAACTTCTCGGTGCTTCTGCGCCGTGATGCCCACTCTCAGCTGGTCTACAAGCATGCCATCTCAACGGTCATGCCGGCCGGCCCGATCCAGCTCTTCGAGGGGGCGAAAGAGGGCGAAGAGGGATGA
PROTEIN sequence
Length: 84
MAGEKSQNVQDIFLNSIRKNKTPVTIFLVNGVKLQGIVTWFDNFSVLLRRDAHSQLVYKHAISTVMPAGPIQLFEGAKEGEEG*