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ERMGT100_2_curated_scaffold_1

Search features with annotation key words

Displaying items 391-416 of 416 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_1_385
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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463319..464170
-----------------
DNA (852bp)
protein (284aa)
ABC-2 type transporter n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CX0_SOLUE
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_1_386
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(464207..464989)
-----------------
DNA (783bp)
protein (261aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RR0_SOLUE
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ABJ87660.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_1_387
unknown

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comp(465034..465516)
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_388
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(465635..468079)
-----------------
DNA (2445bp)
protein (815aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITA1_9PORP id=5225416 bin=16ft_combo_ws3_JS1 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_389
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(468269..468907)
-----------------
DNA (639bp)
protein (213aa)
Metal dependent phosphohydrolase n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A735_NATTJ id=5224156 bin=16ft_combo_ws3_JS1 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
response regulator receiver modulated metal dependent phosphohydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_390
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(468924..469991)
-----------------
DNA (1068bp)
protein (356aa)
twitching motility protein PilT n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037B107B
Twitching motility protein PilT {ECO:0000313|EMBL:ETX07926.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
twitching motility protein PilT
ERMGT100_2_curated_scaffold_1_391
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(469988..471094)
-----------------
DNA (1107bp)
protein (369aa)
twitching motility protein PilT n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003688699
PilT, Tfp pilus assembly protein, pilus retraction ATPase {ECO:0000313|EMBL:KFZ89373.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
twitching motility protein
ERMGT100_2_curated_scaffold_1_392
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(471096..473414)
-----------------
DNA (2319bp)
protein (773aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036441F9
PBS lyase
PBS lyase {ECO:0000313|EMBL:AHK80278.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
ERMGT100_2_curated_scaffold_1_393
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(473462..474055)
-----------------
DNA (594bp)
protein (198aa)
Putative uncharacterized protein n=1 Tax=Salpingoeca sp. (strain ATCC 50818) RepID=F2U351_SALS5 id=5223215 bin=16ft_combo_ws3_JS1 species=unknown genus=Salpingoeca taxon_order=Choanoflagellida taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
FHA domain/TonB domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_394
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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474287..476221
-----------------
DNA (1935bp)
protein (645aa)
Acyl-CoA dehydrogenase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO id=5225245 bin=16ft_combo_ws3_JS1 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acyl-CoA dehydrogenase domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_395
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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476390..478759
-----------------
DNA (2370bp)
protein (790aa)
DNA translocase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK73_9BACT id=5225246 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cell division protein FtsK
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_396
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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478759..480198
-----------------
DNA (1440bp)
protein (480aa)
Ribosomal protein S12 methylthiotransferase RimO n=4 Tax=Anaeromyxobacter RepID=RIMO_ANADE id=5225247 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ribosomal protein S12 methylthiotransferase RimO
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_397
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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480195..480956
-----------------
DNA (762bp)
protein (254aa)
id=5225248 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_398
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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480953..481726
-----------------
DNA (774bp)
protein (258aa)
Outer membrane assembly lipoprotein YfiO n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XX24_9BACT id=5225249 bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
outer membrane assembly lipoprotein YfiO
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_399
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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481734..482342
-----------------
DNA (609bp)
protein (203aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=2 Tax=Rhodothermus marinus RepID=D0MFQ1_RHOM4 id=5225250 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_400
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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482339..483061
-----------------
DNA (723bp)
protein (241aa)
Methyltransferase type 11 n=2 Tax=Chloroflexus RepID=A9WAV2_CHLAA id=5225251 bin=16ft_combo_ws3_JS1 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
type 11 methyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_401
RLO_PLX_64_10, Bacteria

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comp(483360..485333)
-----------------
DNA (1974bp)
protein (658aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I945_CALAS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
ERMGT100_2_curated_scaffold_1_402
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

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comp(485449..486246)
-----------------
DNA (798bp)
protein (266aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035E39AD
3-demethylubiquinone-9 3-methyltransferase
Tax=RBG_13_Actinobacteria_55_18_curated
ERMGT100_2_curated_scaffold_1_403
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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486309..489218
-----------------
DNA (2910bp)
protein (970aa)
DNA polymerase I (EC:2.7.7.7)
DNA-directed DNA polymerase I n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RTR1_9BURK id=5225252 bin=16ft_combo_ws3_JS1 species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_404
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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489208..489864
-----------------
DNA (657bp)
protein (219aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=2 Tax=Thermobifida fusca (strain YX) RepID=COAE_THEFY id=5225253 bin=16ft_combo_ws3_JS1 species=Thermobifida fusca genus=Thermobifida taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_405
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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489995..490981
-----------------
DNA (987bp)
protein (329aa)
Protein chain release factor B n=1 Tax=uncultured Gemmatimonadales bacterium HF4000_15H13 RepID=E7C880_9BACT id=5225254 bin=16ft_combo_ws3_JS1 species=uncultured Gemmatimonadales bacterium HF4000_15H13 genus=unknown taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptide chain release factor 2
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_406
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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490978..492360
-----------------
DNA (1383bp)
protein (461aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ADQ5_THEID id=5225255 bin=16ft_combo_ws3_JS1 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_407
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

492377..493087
-----------------
DNA (711bp)
protein (237aa)
Putative 3-methyladenine DNA glycosylase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D0X3_PELTS id=5225256 bin=16ft_combo_ws3_JS1 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Mpg; 3-methyladenine DNA glycosylase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_408
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

493179..494780
-----------------
DNA (1602bp)
protein (534aa)
id=5225257 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_409
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

495107..497842
-----------------
DNA (2736bp)
protein (912aa)
TonB-dependent receptor n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AK45_IGNAJ id=5225258 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Outer membrane receptor protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_410
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

497842..499938
-----------------
DNA (2097bp)
protein (699aa)
Uncharacterized protein id=24434808 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 391-416 of 416 in total

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