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ERMGT100_2_curated_scaffold_1

Search features with annotation key words

Displaying items 211-240 of 416 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_1_206
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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240638..241936
-----------------
DNA (1299bp)
protein (433aa)
Trigger factor n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SF20_THISK id=5224621 bin=16ft_combo_ws3_JS1 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
tig; ribosome-associated peptidylprolyl cis-trans isomerase, FKBP-type (trigger factor)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_207
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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241961..242545
-----------------
DNA (585bp)
protein (195aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=24520748 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_208
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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242603..243862
-----------------
DNA (1260bp)
protein (420aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AF95_CARHZ id=5224619 bin=16ft_combo_ws3_JS1 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ATP-dependent Clp protease, ATP-binding subunit ClpX
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_209
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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244008..246398
-----------------
DNA (2391bp)
protein (797aa)
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=24520746 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ATP-dependent protease La
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_210
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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246447..247541
-----------------
DNA (1095bp)
protein (365aa)
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45)
Strongly similar to aspartate transaminase [Methanobacterium thermoformicicum] n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXR8_9BACT id=5224617 bin=16ft_combo_ws3_JS1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_211
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

247558..248484
-----------------
DNA (927bp)
protein (309aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
Uncharacterized protein n=4 Tax=Phasianidae RepID=E1C7Y3_CHICK id=5224616 bin=16ft_combo_ws3_JS1 species=unknown genus=unknown taxon_order=Galliformes taxon_class=Aves phylum=Chordata tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_212
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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248573..249841
-----------------
DNA (1269bp)
protein (423aa)
Adenylosuccinate synthetase n=3 Tax=Rhodothermus marinus RepID=D0MIN1_RHOM4 id=5224615 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
adenylosuccinate synthase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_trna_5
unknown

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249910..249982
-----------------
DNA (73bp)
transferRNA Lys
ERMGT100_2_curated_scaffold_1_213
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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250193..250447
-----------------
DNA (255bp)
protein (85aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NSD4_ROSCS
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_214
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

250542..251597
-----------------
DNA (1056bp)
protein (352aa)
GTP-binding protein YchF n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEU1_9BACT
GTP-binding protein YchF
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_215
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

251590..252159
-----------------
DNA (570bp)
protein (190aa)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_216
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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252206..253315
-----------------
DNA (1110bp)
protein (370aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IZY2_PSEUL
ribD; riboflavin biosynthesis protein RibD
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_217
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

253315..253914
-----------------
DNA (600bp)
protein (200aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] id=24505714 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
riboflavin synthase subunit alpha
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_218
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

253911..255158
-----------------
DNA (1248bp)
protein (416aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] id=24505712 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Leptospira fainei genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
GTP cyclohydrolase II (EC:3.5.4.25)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_219
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

255158..255631
-----------------
DNA (474bp)
protein (158aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=24505711 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ribH; 6,7-dimethyl-8-ribityllumazine synthase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_220
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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255628..256059
-----------------
DNA (432bp)
protein (144aa)
NusB antitermination factor; K03625 N utilization substance protein B id=24505710 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
NusB antitermination factor
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_221
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

256056..256793
-----------------
DNA (738bp)
protein (246aa)
phosphatase family protein id=24505709 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
metallophosphoesterase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_222
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

256793..257563
-----------------
DNA (771bp)
protein (257aa)
methyltransferase type 11 id=24505708 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
methyltransferase type 11
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_223
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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257560..258684
-----------------
DNA (1125bp)
protein (375aa)
putative glycosyltransferase (EC:2.4.-.-) id=24505707 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
glycosyl transferase group 1
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_224
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

258681..259661
-----------------
DNA (981bp)
protein (327aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG12_9BACT id=5223760 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
membrane protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_225
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

259661..262354
-----------------
DNA (2694bp)
protein (898aa)
hypothetical protein id=24505705 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_226
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

262362..263315
-----------------
DNA (954bp)
protein (318aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S4W5_9CYAN id=5223762 bin=16ft_combo_ws3_JS1 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
NAD-dependent epimerase/dehydratase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_227
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

263345..264289
-----------------
DNA (945bp)
protein (315aa)
family 2 glycosyl transferase id=24505703 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
family 2 glycosyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_228
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

264282..265010
-----------------
DNA (729bp)
protein (243aa)
Nucleotidyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F931_CONWI id=5223764 bin=16ft_combo_ws3_JS1 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative Nucleotidyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_229
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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265007..266050
-----------------
DNA (1044bp)
protein (348aa)
putative kinase, galactokinase/mevalonate kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] id=24505700 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Predicted kinase related to galactokinase and mevalonate kinase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_230
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

266047..267216
-----------------
DNA (1170bp)
protein (390aa)
Glycosyl transferase group 1 n=2 Tax=Rhodothermus marinus RepID=D0MGM3_RHOM4 id=5223766 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
group 1 glycosyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_231
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

267213..268823
-----------------
DNA (1611bp)
protein (537aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFI5_9BACT id=5223767 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
membrane protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_232
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

268820..269728
-----------------
DNA (909bp)
protein (303aa)
Glycosyl transferase family 2 n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QR55_CHLP8 id=5223768 bin=16ft_combo_ws3_JS1 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycosyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_233
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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269725..270546
-----------------
DNA (822bp)
protein (274aa)
Methyltransferase type 11 n=1 Tax=Frankia sp. CN3 RepID=G6HJZ2_9ACTO id=5223769 bin=16ft_combo_ws3_JS1 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Methyltransferase type 11
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_234
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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270643..271167
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B68264
hypothetical protein
Tax=RBG_13_Bacteroidetes_46_8_curated
Displaying items 211-240 of 416 in total

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